RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CMTM1Q8IZ96 169 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 OR5H2Q8NGV7 314 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 ZNF502Q8TBZ5 544 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 FCAMRQ8WWV6 532 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 DGCR14Q96DF8 476 aaKnown RBP6.7□□□□□ -1.34
COPB1-211ENST00000534234 QTRT1Q9BXR0 403 aaKnown RBP6.7□□□□□ -1.34
COPB1-211ENST00000534234 WFDC10AQ9H1F0 79 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 HIPK2Q9H2X6 1198 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 GAR1Q9NY12 217 aaKnown RBP6.7□□□□□ -1.34
COPB1-211ENST00000534234 COMMD9Q9P000 198 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 ANAPC10Q9UM13 185 aa6.7□□□□□ -1.34
COPB1-211ENST00000534234 HUWE1Q7Z6Z7 4374 aaKnown RBP6.7□□□□□ -1.34
COPB1-211ENST00000534234 IGHV3-35A0A0C4DH35 117 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 SMIM31A0A1B0GVY4 71 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 MARCH11A6NNE9 402 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 A8MWP6 167 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 CYB5BO43169 146 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 TNFAIP8O95379 198 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 RLN1P04808 185 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 SERPINE2P07093 398 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 HLA-DMAP28067 261 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 GPR183P32249 361 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 ZNF585BQ52M93 769 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 THOC7Q6I9Y2 204 aaKnown RBP6.69□□□□□ -1.34
COPB1-211ENST00000534234 SLC25A24Q6NUK1 477 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 UNQ9165/PRO28630Q6UXU0 137 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 HSD17B13Q7Z5P4 300 aaPredicted RBP6.69□□□□□ -1.34
COPB1-211ENST00000534234 TMEM61Q8N0U2 210 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 GDPD1Q8N9F7 314 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 OR1L8Q8NGR8 309 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 SLC25A46Q96AG3 418 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 HINT2Q9BX68 163 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 SRD5A3Q9H8P0 318 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 RETNQ9HD89 108 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 COMMD3Q9UBI1 195 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 MLXQ9UH92 298 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 TNCP24821 2201 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 GPR31O00270 319 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 SNAPC5O75971 98 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 SCAF4O95104 1147 aaKnown RBP6.69□□□□□ -1.34
COPB1-211ENST00000534234 EIF4EP06730 217 aaKnown RBP6.69□□□□□ -1.34
COPB1-211ENST00000534234 HRH1P35367 487 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 G6PCP35575 357 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 TSPAN5P62079 268 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 WT1-ASQ06250 92 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
COPB1-211ENST00000534234 OR52B4Q8NGK2 314 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 VN1R17PQ8TDU5 208 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 GPX8Q8TED1 209 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 MARC2Q969Z3 335 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 FAM110AQ9BQ89 295 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 NDUFA4L2Q9NRX3 87 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 MRPL27Q9P0M9 148 aaKnown RBP6.69□□□□□ -1.34
COPB1-211ENST00000534234 NSG2Q9Y328 171 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 UFC1Q9Y3C8 167 aa6.69□□□□□ -1.34
COPB1-211ENST00000534234 TENM2Q9NT68 2774 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 TRAV25A0A0B4J276 109 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 LCE6AA0A183 80 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 TGOLN2O43493 480 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 APOA1P02647 267 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 C8orf88P0DMB2 117 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 ELLP55199 621 aaPredicted RBP6.68□□□□□ -1.34
COPB1-211ENST00000534234 NCS1P62166 190 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 ANKRD55Q3KP44 614 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 PHLDA2Q53GA4 152 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 LPCAT3Q6P1A2 487 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 BTNL8Q6UX41 500 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 CADM3Q8N126 398 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 LSM10Q969L4 123 aaKnown RBP6.68□□□□□ -1.34
COPB1-211ENST00000534234 CMTM3Q96MX0 182 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 FUNDC2Q9BWH2 189 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 OR51B2Q9Y5P1 312 aa6.68□□□□□ -1.34
COPB1-211ENST00000534234 IGHV3-21A0A0B4J1V1 117 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 OR2T8A6NH00 312 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 S100GP29377 79 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 MFAP2P55001 183 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 VBP1P61758 197 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 SNX29P2Q8IUI4 249 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 IL17DQ8TAD2 202 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 SCARB1Q8WTV0 552 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 BSCL2Q96G97 398 aaPredicted RBP6.67□□□□□ -1.34
COPB1-211ENST00000534234 TMEM56Q96MV1 263 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 TSC22D3Q99576 134 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 ZNF436Q9C0F3 470 aaPredicted RBP6.67□□□□□ -1.34
COPB1-211ENST00000534234 FXYD6Q9H0Q3 95 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 FKBP11Q9NYL4 201 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 C21orf62Q9NYP8 219 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 PRNDQ9UKY0 176 aa6.67□□□□□ -1.34
COPB1-211ENST00000534234 F11RQ9Y624 299 aaKnown RBP6.67□□□□□ -1.34
COPB1-211ENST00000534234 DBX1A6NMT0 343 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 ELK1P19419 428 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 SPSB3Q6PJ21 355 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 TBC1D26Q86UD7 250 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 UBAC2Q8NBM4 344 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 OR1L6Q8NGR2 347 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 OR5B3Q8NH48 314 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 TMEM190Q8WZ59 177 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 CHRDL1Q9BU40 450 aa6.66□□□□□ -1.34
COPB1-211ENST00000534234 C5orf66Q9H5L9 145 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms