RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TTC28Q96AY4 2481 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 SLC17A3O00476 420 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 DUTP33316 252 aaKnown RBP16■□□□□ 0.15
CAPN1-226ENST00000533820 SMIM21Q3B7S5 101 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 ZNF738Q8NE65 137 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 TXN2Q99757 166 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 PXMP4Q9Y6I8 212 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 PRDX2P32119 198 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 FAM214BQ7L5A3 538 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 TNFRSF14Q92956 283 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 CST9LQ9H4G1 147 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 COLQQ9Y215 455 aaPredicted RBP16■□□□□ 0.15
CAPN1-226ENST00000533820 COL27A1Q8IZC6 1860 aaPredicted RBP16■□□□□ 0.15
CAPN1-226ENST00000533820 ACTL6BO94805 426 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 ZNF134P52741 427 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 SPRNQ5BIV9 151 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 HES3Q5TGS1 186 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 CISD2Q8N5K1 135 aaKnown RBP16■□□□□ 0.15
CAPN1-226ENST00000533820 MGST2Q99735 147 aa16■□□□□ 0.15
CAPN1-226ENST00000533820 MDFIC2A0A1B0GVS7 189 aa15.99■□□□□ 0.15
CAPN1-226ENST00000533820 SPINK4O60575 86 aa15.99■□□□□ 0.15
CAPN1-226ENST00000533820 SRP14P37108 136 aaKnown RBP15.99■□□□□ 0.15
CAPN1-226ENST00000533820 Q6ZN92 141 aa15.99■□□□□ 0.15
CAPN1-226ENST00000533820 VENTXO95231 258 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 CBLN1P23435 193 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 VWC2Q2TAL6 325 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 Q6ZWC4 215 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 OCC1Q8TAD7 63 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 SFRP2Q96HF1 295 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 FOXH1O75593 365 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 FRMD6-AS1P0C7T7 363 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 KITLGP21583 273 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 INO80CQ6PI98 192 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-226ENST00000533820 Q6ZT83 130 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 LAMTOR2Q9Y2Q5 125 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 COX11Q9Y6N1 276 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 C15orf65H3BRN8 121 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 PDE6DO43924 150 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 TPTE2P1Q5T6R2 138 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 C1orf229Q6ZS94 237 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-226ENST00000533820 WDR31Q8NA23 367 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 TMEM106BQ9NUM4 274 aa15.98■□□□□ 0.15
CAPN1-226ENST00000533820 YTHDF2Q9Y5A9 579 aaKnown RBP15.98■□□□□ 0.15
CAPN1-226ENST00000533820 TPRP12270 2363 aaKnown RBP15.97■□□□□ 0.15
CAPN1-226ENST00000533820 CD59P13987 128 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 ERVK-16P61578 105 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 C9orf106Q8NAJ2 232 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 GGTLC1Q9BX51 225 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 PCNX1Q96RV3 2341 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 NKX2-8O15522 239 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 HLA-DRB5Q30154 266 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 TMEM178AQ8NBL3 297 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 TMEM140Q9NV12 185 aa15.97■□□□□ 0.15
CAPN1-226ENST00000533820 TMEM265A0A087WTH1 108 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 ADMP35318 185 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 HNRNPA3P51991 378 aaKnown RBP15.96■□□□□ 0.15
CAPN1-226ENST00000533820 MORN2Q502X0 79 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 ZDHHC11Q9H8X9 412 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 SPTBN2O15020 2390 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 PKDREJQ9NTG1 2253 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 IGKV1D-17A0A075B6S4 117 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 PSG1P11464 419 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 RPL15P61313 204 aaKnown RBP15.96■□□□□ 0.15
CAPN1-226ENST00000533820 ZNF718Q3SXZ3 478 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 TEX43Q6ZNM6 134 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 ST6GALNAC3Q8NDV1 305 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 HSPB9Q9BQS6 159 aa15.96■□□□□ 0.15
CAPN1-226ENST00000533820 KIR2DL2P43627 348 aaPredicted RBP15.96■□□□□ 0.14
CAPN1-226ENST00000533820 RANP62826 216 aaKnown RBP15.96■□□□□ 0.14
CAPN1-226ENST00000533820 S1PR3Q99500 378 aa15.96■□□□□ 0.14
CAPN1-226ENST00000533820 KCNIP2Q9NS61 270 aa15.96■□□□□ 0.14
CAPN1-226ENST00000533820 DMXL2Q8TDJ6 3036 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 IGHV2-70DA0A0C4DH43 119 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 GFRA3O60609 400 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 RPL31P62899 125 aaKnown RBP15.95■□□□□ 0.14
CAPN1-226ENST00000533820 ZNF90Q03938 601 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 DEFB108BQ8NET1 73 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 ZNF596Q8TC21 504 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 GUCD1Q96NT3 240 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 MSMPQ1L6U9 139 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 MOB3BQ86TA1 216 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 BTF3L4Q96K17 158 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 ELOVL5Q9NYP7 299 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 TCF19Q9Y242 345 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 ABCA1O95477 2261 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 PTPRBP23467 1997 aa15.95■□□□□ 0.14
CAPN1-226ENST00000533820 TYMSP04818 313 aa15.94■□□□□ 0.14
CAPN1-226ENST00000533820 SLC35B1P78383 322 aa15.94■□□□□ 0.14
CAPN1-226ENST00000533820 DUX4L9Q6RFH8 374 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-226ENST00000533820 OR4P4Q8NGL7 312 aa15.94■□□□□ 0.14
CAPN1-226ENST00000533820 RYDENQ9NUL5 291 aaKnown RBP15.94■□□□□ 0.14
CAPN1-226ENST00000533820 CLCF1Q9UBD9 225 aa15.94■□□□□ 0.14
CAPN1-226ENST00000533820 TOMM40O96008 361 aa15.94■□□□□ 0.14
CAPN1-226ENST00000533820 ASPHD1Q5U4P2 390 aa15.94■□□□□ 0.14
CAPN1-226ENST00000533820 CDX4O14627 284 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-226ENST00000533820 IGKV3-15P01624 115 aa15.93■□□□□ 0.14
CAPN1-226ENST00000533820 GATA2P23769 480 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-226ENST00000533820 MOGAT3Q86VF5 341 aa15.93■□□□□ 0.14
CAPN1-226ENST00000533820 OR10G8Q8NGN5 311 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms