RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RELBQ01201 579 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 SRSF12Q8WXF0 261 aaKnown RBP14.72□□□□□ -0.05
PHRF1-205ENST00000533464 TM4SF20Q53R12 229 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 GOLT1AQ6ZVE7 132 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 MYOZ3Q8TDC0 251 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 SSBP3Q9BWW4 388 aaPredicted RBP14.72□□□□□ -0.05
PHRF1-205ENST00000533464 RNF224P0DH78 156 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 SCGB1D4Q6XE38 83 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 PNRC2Q9NPJ4 139 aaKnown RBP14.72□□□□□ -0.05
PHRF1-205ENST00000533464 WNK2Q9Y3S1 2297 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 IGHV1-18A0A0C4DH31 117 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 CGAP01215 116 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 FAM166AQ6J272 317 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 BMPERQ8N8U9 685 aa14.72□□□□□ -0.05
PHRF1-205ENST00000533464 RAMP3O60896 148 aa14.71□□□□□ -0.05
PHRF1-205ENST00000533464 FOXH1O75593 365 aa14.71□□□□□ -0.05
PHRF1-205ENST00000533464 PHF3Q92576 2039 aaKnown RBP14.71□□□□□ -0.05
PHRF1-205ENST00000533464 YPEL1O60688 119 aa14.71□□□□□ -0.05
PHRF1-205ENST00000533464 RNF144BQ7Z419 303 aa14.71□□□□□ -0.05
PHRF1-205ENST00000533464 YPEL2Q96QA6 119 aa14.71□□□□□ -0.05
PHRF1-205ENST00000533464 CBY3A6NI87 242 aa14.71□□□□□ -0.06
PHRF1-205ENST00000533464 VENTXO95231 258 aa14.71□□□□□ -0.06
PHRF1-205ENST00000533464 CKS2P33552 79 aa14.71□□□□□ -0.06
PHRF1-205ENST00000533464 ID3Q02535 119 aa14.71□□□□□ -0.06
PHRF1-205ENST00000533464 LHFPL1Q86WI0 220 aa14.71□□□□□ -0.06
PHRF1-205ENST00000533464 SRIP30626 198 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 PDLIM4P50479 330 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 CLDN16Q9Y5I7 305 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 SAA2-SAA4A0A096LPE2 208 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 SAA2P0DJI9 122 aaPredicted RBP14.7□□□□□ -0.06
PHRF1-205ENST00000533464 MAS1LP35410 378 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 CDX1P47902 265 aaPredicted RBP14.7□□□□□ -0.06
PHRF1-205ENST00000533464 MORN2Q502X0 79 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 IFITM10A6NMD0 228 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 FHL1Q13642 323 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 S4R3C0 116 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 CA7P43166 264 aa14.7□□□□□ -0.06
PHRF1-205ENST00000533464 ZNF324BQ6AW86 544 aaPredicted RBP14.7□□□□□ -0.06
PHRF1-205ENST00000533464 AMY1AP04745 511 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 CD99P14209 185 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 ZNF385CQ66K41 422 aaPredicted RBP14.69□□□□□ -0.06
PHRF1-205ENST00000533464 SCN8AQ9UQD0 1980 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 TTC28Q96AY4 2481 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 IGHV3OR16-13A0A075B7E8 117 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 IGHV3-74A0A0B4J1X5 117 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 GRIFINA4D1Z8 144 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 F8VVB4 439 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 F8VWA3 439 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 GATA2P23769 480 aaPredicted RBP14.69□□□□□ -0.06
PHRF1-205ENST00000533464 MPDZO75970 2070 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 NBEAP1P0C6P0 100 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 EBLN2Q6P2I7 272 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 CLDND2Q8NHS1 167 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 M0QZK8 103 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 GGCTO75223 188 aaKnown RBP14.69□□□□□ -0.06
PHRF1-205ENST00000533464 CD55P08174 381 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 TCTAP57738 103 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 LCN2P80188 198 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 PSG9Q00887 426 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 WFIKKN1Q96NZ8 548 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 ATP5G2Q06055 141 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 ZNF841Q6ZN19 808 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 NEU1Q99519 415 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 CDC42EP3Q9UKI2 254 aa14.69□□□□□ -0.06
PHRF1-205ENST00000533464 GCGP01275 180 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 IGKV1D-33P01593 117 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 IGKV1-33P01594 117 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 SUPT4H1P63272 117 aaKnown RBP14.68□□□□□ -0.06
PHRF1-205ENST00000533464 PLAURQ03405 335 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 ABCA1O95477 2261 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 IL18BPO95998 194 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 ATP5G3P48201 142 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 SAA1P0DJI8 122 aaPredicted RBP14.68□□□□□ -0.06
PHRF1-205ENST00000533464 HERVK_113P61574 105 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 PRB3Q04118 309 aaPredicted RBP14.68□□□□□ -0.06
PHRF1-205ENST00000533464 RSPO3Q9BXY4 272 aaPredicted RBP14.68□□□□□ -0.06
PHRF1-205ENST00000533464 CBLN1P23435 193 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 NPPCP23582 126 aa14.68□□□□□ -0.06
PHRF1-205ENST00000533464 NEU4Q8WWR8 484 aaPredicted RBP14.68□□□□□ -0.06
PHRF1-205ENST00000533464 GPX4P36969 197 aaPredicted RBP14.67□□□□□ -0.06
PHRF1-205ENST00000533464 FER1L5A0AVI2 2057 aa14.67□□□□□ -0.06
PHRF1-205ENST00000533464 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.67□□□□□ -0.06
PHRF1-205ENST00000533464 SRSF3P84103 164 aaKnown RBP14.67□□□□□ -0.06
PHRF1-205ENST00000533464 ICAM4Q14773 271 aa14.67□□□□□ -0.06
PHRF1-205ENST00000533464 KIAA2026Q5HYC2 2103 aa14.67□□□□□ -0.06
PHRF1-205ENST00000533464 SCO2A0A1W2PP80 73 aa14.67□□□□□ -0.06
PHRF1-205ENST00000533464 LEPROTL1O95214 131 aa14.67□□□□□ -0.06
PHRF1-205ENST00000533464 CACNG8Q8WXS5 425 aa14.67□□□□□ -0.06
PHRF1-205ENST00000533464 ZNF407Q9C0G0 2248 aa14.67□□□□□ -0.06
PHRF1-205ENST00000533464 PTPRDP23468 1912 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 FAM106AQ4KMX7 169 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 LRTM2Q8N967 370 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 OR4D5Q8NGN0 318 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 LINC00518Q8N0U6 118 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 CREBBPQ92793 2442 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 DOCK7Q96N67 2140 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 PCNX1Q96RV3 2341 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 SLC17A3O00476 420 aa14.66□□□□□ -0.06
PHRF1-205ENST00000533464 BTF3P20290 206 aaKnown RBP14.66□□□□□ -0.06
PHRF1-205ENST00000533464 RPL13AP40429 203 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms