RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 TATDN3Q17R31 274 aa8.67□□□□□ -1.02
CLCF1-202ENST00000533438 RTL8BQ17RB0 113 aa8.67□□□□□ -1.02
CLCF1-202ENST00000533438 TBC1D26Q86UD7 250 aa8.67□□□□□ -1.02
CLCF1-202ENST00000533438 SGPP2Q8IWX5 399 aa8.67□□□□□ -1.02
CLCF1-202ENST00000533438 TEX45Q8NA69 505 aa8.67□□□□□ -1.02
CLCF1-202ENST00000533438 OR5T1Q8NG75 326 aa8.67□□□□□ -1.02
CLCF1-202ENST00000533438 RANGRFQ9HD47 186 aaPredicted RBP8.67□□□□□ -1.02
CLCF1-202ENST00000533438 ZNF355PQ9NSJ1 428 aa8.67□□□□□ -1.02
CLCF1-202ENST00000533438 FAM212BQ9NTI7 297 aaPredicted RBP8.67□□□□□ -1.02
CLCF1-202ENST00000533438 A0A0B4J293 547 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 A0A0G2JLM5 398 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 C13orf42A0A1B0GVH6 325 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 C9orf170A2RU37 121 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 SNRPGP15A8MWD9 76 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 H0Y980 276 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 SFT2D2O95562 160 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 RPL30P62888 115 aaKnown RBP8.66□□□□□ -1.02
CLCF1-202ENST00000533438 DHRS2Q13268 280 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 LYG2Q86SG7 212 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 SBSPONQ8IVN8 264 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 OR51H1Q8NH63 302 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 OR4C12Q96R67 309 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 GPHA2Q96T91 129 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 GPN1Q9HCN4 374 aaPredicted RBP8.66□□□□□ -1.02
CLCF1-202ENST00000533438 KCNIP3Q9Y2W7 256 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 DNAH7Q8WXX0 4024 aa8.66□□□□□ -1.02
CLCF1-202ENST00000533438 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.02
CLCF1-202ENST00000533438 CRYZL1O95825 349 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 IGLV1-51P01701 117 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 HLA-AP01891 365 aaKnown RBP8.65□□□□□ -1.02
CLCF1-202ENST00000533438 OR5AC1P0C628 307 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 ANXA3P12429 323 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 ZP3P21754 424 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 VAMP1P23763 118 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 UCP1P25874 307 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 KIR2DS2P43631 304 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 UBE2KP61086 200 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 DEFA5Q01523 94 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 KLF5Q13887 457 aaPredicted RBP8.65□□□□□ -1.02
CLCF1-202ENST00000533438 PRSS8Q16651 343 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 VMA21Q3ZAQ7 101 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 ZNF343Q6P1L6 599 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 OSR1Q8TAX0 266 aaPredicted RBP8.65□□□□□ -1.02
CLCF1-202ENST00000533438 CD300LFQ8TDQ1 290 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 ZNF431Q8TF32 576 aaPredicted RBP8.65□□□□□ -1.02
CLCF1-202ENST00000533438 GLYATL2Q8WU03 294 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 TCTEX1D2Q8WW35 142 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 TP53RKQ96S44 253 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 SEC22CQ9BRL7 303 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 ELOVL1Q9BW60 279 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 PRELID3BQ9Y3B1 194 aa8.65□□□□□ -1.02
CLCF1-202ENST00000533438 EPPK1P58107 5090 aaKnown RBP8.65□□□□□ -1.03
CLCF1-202ENST00000533438 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 SACSQ9NZJ4 4579 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 A0A0B4J2A0 478 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 MSGN1A6NI15 193 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 CREBL2O60519 120 aaPredicted RBP8.64□□□□□ -1.03
CLCF1-202ENST00000533438 RBMXL2O75526 392 aaKnown RBP8.64□□□□□ -1.03
CLCF1-202ENST00000533438 FRMD6-AS1P0C7T7 363 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 BRWD1-AS2P59051 145 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 SRPXP78539 464 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 TMEM187Q14656 261 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 TNXAQ16473 311 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 ZNF585BQ52M93 769 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 IL34Q6ZMJ4 242 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 Q8N1Y9 231 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 OR52B4Q8NGK2 314 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 MITD1Q8WV92 249 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 SRSF12Q8WXF0 261 aaKnown RBP8.64□□□□□ -1.03
CLCF1-202ENST00000533438 USMG5Q96IX5 58 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 TMEM56Q96MV1 263 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 PHB2Q99623 299 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 TMEM222Q9H0R3 208 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 COA4Q9NYJ1 87 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 PEF1Q9UBV8 284 aaKnown RBP8.64□□□□□ -1.03
CLCF1-202ENST00000533438 SHPKQ9UHJ6 478 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 ALG5Q9Y673 324 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 TMEM56-RWDD3S4R434 201 aa8.64□□□□□ -1.03
CLCF1-202ENST00000533438 PIGBOS1A0A0B4J2F0 54 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 ANKRD34BA5PLL1 514 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 CDS2O95674 445 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 TRBV12-3P01733 135 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 OR9G9P0C7N8 305 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 SAA1P0DJI8 122 aaPredicted RBP8.63□□□□□ -1.03
CLCF1-202ENST00000533438 APELAP0DMC3 54 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 RPA2P15927 270 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 ANKRD55Q3KP44 614 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 SP6Q3SY56 376 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 SPAG16Q8N0X2 631 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 LRTM2Q8N967 370 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 OR9G4Q8NGQ1 327 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 COQ8AQ8NI60 647 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 IL22RA2Q969J5 263 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 ZNF430Q9H8G1 570 aaPredicted RBP8.63□□□□□ -1.03
CLCF1-202ENST00000533438 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 BIRC6Q9NR09 4857 aa8.63□□□□□ -1.03
CLCF1-202ENST00000533438 TRBV9A0A0B4J1U6 114 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms