RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 GPR137BO60478 399 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 OR2B8PP59922 312 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 VAMP2P63027 116 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 FBLN7Q53RD9 439 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 COMMD5Q9GZQ3 224 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 MAGT1Q9H0U3 335 aa11.34□□□□□ -0.59
TRIM3-212ENST00000533064 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 FGF16O43320 207 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-212ENST00000533064 IFNA17P01571 189 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 CRYGBP07316 175 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 IL6RP08887 468 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-212ENST00000533064 FGF2P09038 288 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 MAS1LP35410 378 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 ZNF429Q86V71 674 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 OR2C3Q8N628 320 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 STOML3Q8TAV4 291 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 ZNF418Q8TF45 676 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-212ENST00000533064 ST8SIA2Q92186 375 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 RAB40CQ96S21 281 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 ZNF430Q9H8G1 570 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-212ENST00000533064 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 FOXA2Q9Y261 457 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-212ENST00000533064 CHST1O43916 411 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 NXPH3O95157 252 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 HTR2BP41595 481 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 TNXAQ16473 311 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 PRSS8Q16651 343 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 TMEM86BQ8N661 226 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 Q8N9W7 124 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 CYTL1Q9NRR1 136 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 TPSG1Q9NRR2 321 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-212ENST00000533064 TMEM14BQ9NUH8 114 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 OR51B2Q9Y5P1 312 aa11.33□□□□□ -0.6
TRIM3-212ENST00000533064 FN1P02751 2386 aaKnown RBP11.32□□□□□ -0.6
TRIM3-212ENST00000533064 SYNGR2O43760 224 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 MED6O75586 246 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 CNIH1O95406 144 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 GNB1P62873 340 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 TUSC1Q2TAM9 212 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 SCARB1Q8WTV0 552 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 PHYHIPLQ96FC7 376 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
TRIM3-212ENST00000533064 SLC25A31Q9H0C2 315 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 ZNF257Q9Y2Q1 563 aa11.32□□□□□ -0.6
TRIM3-212ENST00000533064 TMEM50AO95807 157 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 CA2P00918 260 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
TRIM3-212ENST00000533064 CAV2P51636 162 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 PAX9P55771 341 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 SPCS3P61009 180 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
TRIM3-212ENST00000533064 RPL23AP62750 156 aaKnown RBP11.31□□□□□ -0.6
TRIM3-212ENST00000533064 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 PJVKQ0ZLH3 352 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 C5orf56Q8N8D9 126 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 OR1L8Q8NGR8 309 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 OR52E5Q8NH55 327 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 FBXL17Q9UF56 701 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 WSB1Q9Y6I7 421 aa11.31□□□□□ -0.6
TRIM3-212ENST00000533064 FAM24AA6NFZ4 105 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 CEBPZOSA8MTT3 80 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 FAM157CP0CG43 387 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 RPL27AP46776 148 aaKnown RBP11.3□□□□□ -0.6
TRIM3-212ENST00000533064 TAS2R30P59541 319 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 EIF5AP63241 154 aaKnown RBP11.3□□□□□ -0.6
TRIM3-212ENST00000533064 EWSR1Q01844 656 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRIM3-212ENST00000533064 AARDQ4LEZ3 155 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 ALKAL2Q6UX46 152 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 SMIM8Q96KF7 97 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 JMJD8Q96S16 334 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 HINT2Q9BX68 163 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 TEX50A0A1B0GTY4 177 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 IGSF23A1L1A6 192 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 FCN1O00602 326 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 OPN1MWP04001 364 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 COMPP49747 757 aaPredicted RBP11.3□□□□□ -0.6
TRIM3-212ENST00000533064 RAB14P61106 215 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 BAXQ07812 192 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 CLLU1Q5K131 121 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 ZNF562Q6V9R5 426 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 BAP18Q8IXM2 172 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
TRIM3-212ENST00000533064 TMEM252Q8N6L7 170 aa11.3□□□□□ -0.6
TRIM3-212ENST00000533064 TEP1Q99973 2627 aaKnown RBP11.29□□□□□ -0.6
TRIM3-212ENST00000533064 NF1P21359 2839 aa11.29□□□□□ -0.6
TRIM3-212ENST00000533064 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
TRIM3-212ENST00000533064 CRLF1O75462 422 aa11.29□□□□□ -0.6
TRIM3-212ENST00000533064 JTBO76095 146 aa11.29□□□□□ -0.6
TRIM3-212ENST00000533064 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
TRIM3-212ENST00000533064 NHLH2Q02577 135 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms