RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	SP6	Q3SY56	376 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	C19orf54	Q5BKX5	351 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	LCE4A	Q5TA78	99 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	UNQ5815/PRO19632	Q6UWF5	114 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	TMED4	Q7Z7H5	227 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	MMD2	Q8IY49	270 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	LFNG	Q8NES3	379 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	OR4A5	Q8NH83	315 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	SRSF12	Q8WXF0	261 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM230	Q96A57	120 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	SCGB3A2	Q96PL1	93 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	PHB2	Q99623	299 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	AIFM2	Q9BRQ8	373 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	RTBDN	Q9BSG5	229 aa	Predicted RBP	6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	NAA60	Q9H7X0	242 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	FAM212B	Q9NTI7	297 aa	Predicted RBP	6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	BET1L	Q9NYM9	111 aa		6.27	□□□□□ -1.41
PUM1-223	ENST00000532678	TRAV3	A0A0B4J244	114 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	CRYM-AS1	A6NIL9	109 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	CENPX	A8MT69	81 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	UPK2	O00526	184 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	KRAS	P01116	189 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	IGKV1-39	P01597	117 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	IGHG4	P01861	327 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	IGKV1D-39	P04432	117 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	APELA	P0DMC3	54 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	MYOD1	P15172	320 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	AKR1C4	P17516	323 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	HLA-G	P17693	338 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	PPIF	P30405	207 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	BTC	P35070	178 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	RPL27A	P46776	148 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	CCR6	P51684	374 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	OR2B8P	P59922	312 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	RPL8	P62917	257 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	FOXE3	Q13461	319 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	RBMS2	Q15434	407 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	CXorf66	Q5JRM2	361 aa	Predicted RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	TEX38	Q6PEX7	206 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	COMMD1	Q8N668	190 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	MINDY2	Q8NBR6	621 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	ADAD2	Q8NCV1	583 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	DUX3	Q96PT4	197 aa		6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	SLC25A21	Q9BQT8	299 aa	Predicted RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	C7orf50	Q9BRJ6	194 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	FOXA2	Q9Y261	457 aa	Predicted RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	TSSC4	Q9Y5U2	329 aa	Predicted RBP	6.26	□□□□□ -1.41
PUM1-223	ENST00000532678	MSGN1	A6NI15	193 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	PLA2G10	O15496	165 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	LYRM1	O43325	122 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	SOX15	O60248	233 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	B3GALNT1	O75752	331 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	NDUFB6	O95139	128 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	ELANE	P08246	267 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	OR9G9	P0C7N8	305 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	UCP1	P25874	307 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	PSMB8	P28062	276 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	MAS1L	P35410	378 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	AKR1C2	P52895	323 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	RPL23A	P62750	156 aa	Known RBP	6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM267	Q0VDI3	215 aa	Predicted RBP	6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	DEFB121	Q5J5C9	76 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	ASPHD1	Q5U4P2	390 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	SGPP2	Q8IWX5	399 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	CENPS	Q8N2Z9	138 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	WFDC9	Q8NEX5	89 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	OR5M8	Q8NGP6	311 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	RNASE11	Q8TAA1	199 aa	Known RBP	6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	CASTOR1	Q8WTX7	329 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	SEC22A	Q96IW7	307 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	FYTTD1	Q96QD9	318 aa	Known RBP	6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	NSG2	Q9Y328	171 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	NUBP2	Q9Y5Y2	271 aa		6.25	□□□□□ -1.41
PUM1-223	ENST00000532678	NBEAL2	Q6ZNJ1	2754 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678		A0A1B0GW64	132 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	HMX3	A6NHT5	357 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	C15orf61	A6NNL5	157 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TEX22	C9J3V5	150 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	UPK1B	O75841	260 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	SNAPC5	O75971	98 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	ATG12	O94817	140 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	IGKV1-5	P01602	117 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	IL6R	P08887	468 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TPPP2	P59282	170 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	SUPT4H1	P63272	117 aa	Known RBP	6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	DEFA5	Q01523	94 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	DHODH	Q02127	395 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	IZUMO4	Q1ZYL8	232 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	AKIRIN2	Q53H80	203 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM65	Q6PI78	240 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	H2BFWT	Q7Z2G1	175 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	ZNF695	Q8IW36	515 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	RNF152	Q8N8N0	203 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	KLHL30-AS1	Q8NEE0	82 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	OR5T1	Q8NG75	326 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	LHFPL5	Q8TAF8	219 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TMEM68	Q96MH6	324 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	TSC22D3	Q99576	134 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	SPIN2A	Q99865	258 aa		6.24	□□□□□ -1.41
PUM1-223	ENST00000532678	SPIN2B	Q9BPZ2	258 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms