RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 IGLV10-54A0A075B6I4 117 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 IGKV1D-17A0A075B6S4 117 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 MDFIC2A0A1B0GVS7 189 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 TMEM235A6NFC5 223 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 IGKV1-17P01599 117 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 CD24P25063 80 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 S100A7P31151 101 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 GABRA4P48169 554 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 DEFA1P59665 94 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 RAB4BP61018 213 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 AP1S1P61966 158 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 C3orf33Q6P1S2 294 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 TMPPEQ6ZT21 453 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 LINC00304Q8N9R0 145 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 CT55Q8WUE5 264 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 HOPXQ9BPY8 73 aaPredicted RBP2.27□□□□□ -2.05
USP47-211ENST00000531513 AICDAQ9GZX7 198 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 EFCAB1Q9HAE3 211 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 XAGE1AQ9HD64 81 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 BATF3Q9NR55 127 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 FBXL12Q9NXK8 326 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 FUT9Q9Y231 359 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 MINOS1-NBL1R4GNA1 71 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 TMEM56-RWDD3S4R434 201 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 FHAD1B1AJZ9 1412 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 PPP5D1E7EU14 171 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 TXNDC9O14530 226 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 ATG12O94817 140 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 IFNA21P01568 189 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 SULT1A3P0DMM9 295 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 SULT1A4P0DMN0 295 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 CSN1S1P47710 185 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 CRYBA4P53673 196 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 FXYD7P58549 80 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 HSPE1P61604 102 aaKnown RBP2.26□□□□□ -2.05
USP47-211ENST00000531513 TNFRSF9Q07011 255 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 MIAQ16674 131 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 C12orf74Q32Q52 190 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 C9orf64Q5T6V5 341 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 GDPD1Q8N9F7 314 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 OR13C6PQ8NH95 151 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 GNPDA2Q8TDQ7 276 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 FGF13Q92913 245 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 RNASE7Q9H1E1 156 aaKnown RBP2.26□□□□□ -2.05
USP47-211ENST00000531513 PYCARDQ9ULZ3 195 aa2.26□□□□□ -2.05
USP47-211ENST00000531513 ZNF638Q14966 1978 aaKnown RBP2.26□□□□□ -2.05
USP47-211ENST00000531513 RTL1A6NKG5 1358 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 A0A0J9YX75 114 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 EXOC1LA0A1B0GW35 172 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 A0A1W2PQD3 144 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 PIRO00625 290 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 CTSGP08311 255 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 P0C880 135 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 ZNF728P0DKX0 622 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 CA5AP35218 305 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 CCL20P78556 96 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 S100A12P80511 92 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 AKR1C1Q04828 323 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 OR4C16Q8NGL9 310 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 RASSF5Q8WWW0 418 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 ZNF471Q9BX82 626 aaPredicted RBP2.25□□□□□ -2.05
USP47-211ENST00000531513 C11orf68Q9H3H3 251 aaKnown RBP2.25□□□□□ -2.05
USP47-211ENST00000531513 UQCC1Q9NVA1 299 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 FAM215AQ9Y5M1 114 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 ZSWIM8A7E2V4 1837 aa2.25□□□□□ -2.05
USP47-211ENST00000531513 LOC105371267A0A1B0GV96 52 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 DPRXA6NFQ7 191 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 C11orf86A6NJI1 115 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 LEPROTO15243 131 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 GNRH2O43555 120 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 PFDN1O60925 122 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 IFNA14P01570 189 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 IGKV1-5P01602 117 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 SERPINE1P05121 402 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 UCHL1P09936 223 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 IDO1P14902 403 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 SERPINB1P30740 379 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 TAS2R41P59536 307 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 GNG3P63215 75 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 HBA1P69905 142 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 TCF24Q7RTU0 167 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 PHF13Q86YI8 300 aaPredicted RBP2.24□□□□□ -2.05
USP47-211ENST00000531513 ACOT12Q8WYK0 555 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 TMEM70Q9BUB7 260 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 C20orf27Q9GZN8 174 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 IL36BQ9NZH7 164 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 UFC1Q9Y3C8 167 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 RBM7Q9Y580 266 aaKnown RBP2.24□□□□□ -2.05
USP47-211ENST00000531513 NEO1Q92859 1461 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 HECW1Q76N89 1606 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 SIPA1L1O43166 1804 aa2.24□□□□□ -2.05
USP47-211ENST00000531513 SHANK1Q9Y566 2161 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 ZNF682O95780 498 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 PRM2P04554 102 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 CRHP06850 196 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 BPGMP07738 259 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 RBP1P09455 135 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 CCL5P13501 91 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST1H2BOP23527 126 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST1H2BBP33778 126 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms