RNA–Protein interactions for RNA: ENST00000531428.1

PIK3C2A-203, Transcript of phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha, humanhuman

TSL 1 (best)

Gene PIK3C2A, Length 1,593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2A-203ENST00000531428 TMED6Q8WW62 240 aa12.68□□□□□ -0.38
PIK3C2A-203ENST00000531428 GNPNAT1Q96EK6 184 aaPredicted RBP12.68□□□□□ -0.38
PIK3C2A-203ENST00000531428 RITA1Q96K30 269 aa12.68□□□□□ -0.38
PIK3C2A-203ENST00000531428 PARD6GQ9BYG4 376 aaPredicted RBP12.68□□□□□ -0.38
PIK3C2A-203ENST00000531428 PMS2P5A8MQ11 134 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 SLC25A17O43808 307 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 IFNA5P01569 189 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 SPP1P10451 314 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 HOXA1P49639 335 aaPredicted RBP12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 EBI3Q14213 229 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 SSX2Q16385 188 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 HAPLN4Q86UW8 402 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 MMD2Q8IY49 270 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 RNF141Q8WVD5 230 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 ZNF430Q9H8G1 570 aaPredicted RBP12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 PLEKHA3Q9HB20 300 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 NDUFA4L2Q9NRX3 87 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 CDC42EP3Q9UKI2 254 aa12.67□□□□□ -0.38
PIK3C2A-203ENST00000531428 NSD1Q96L73 2696 aaPredicted RBP12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 C15orf62A8K5M9 175 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 MOSP00540 346 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 IFNA10P01566 189 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 F2RL1P55085 397 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 SLC38A11Q08AI6 406 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 ARL16Q0P5N6 197 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 PRSS8Q16651 343 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 OR2T10Q8NGZ9 312 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 GGACTQ9BVM4 153 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 MED9Q9NWA0 146 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 SIGLEC9Q9Y336 463 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 AUP1Q9Y679 476 aa12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 NIPBLQ6KC79 2804 aaeCLIP12.66□□□□□ -0.38
PIK3C2A-203ENST00000531428 CENPVL3A0A0U1RRI6 287 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 A0A1W2PN81 502 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 A0A1W2PRD5 423 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 A0A1W2PRF3 423 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 A0A1W2PRM7 423 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 NPFFO15130 113 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 FGF16O43320 207 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 OR8U8P0C7N1 319 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 CHRNA7P36544 502 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 RAB11AP62491 216 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 THNSL2Q86YJ6 484 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 MRPL41Q8IXM3 137 aaKnown RBP12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 SLC7A5P1Q8MH63 180 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 NPBQ8NG41 125 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 RBMXL1Q96E39 390 aaKnown RBP12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 AJUBAQ96IF1 538 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.38
PIK3C2A-203ENST00000531428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■■■□ 23.5
PIK3C2A-203ENST00000531428 FAM157CP0CG43 387 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 BRS3P32247 399 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 SAA4P35542 130 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 RAB5CP51148 216 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 MRGPRG-AS1Q2M3A8 158 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 VWC2Q2TAL6 325 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 FAM74A1Q5RGS3 127 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 OR8G2PQ6IF36 304 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 PPP1R27Q86WC6 154 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 TEX29Q8N6K0 151 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 SCGB1C1Q8TD33 95 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 TMEM147Q9BVK8 224 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 HINT2Q9BX68 163 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 HIF1ANQ9NWT6 349 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 C2CD3Q4AC94 2353 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 SONP18583 2426 aaKnown RBP12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 IGHV1-69DA0A0B4J2H0 117 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 RRHO14718 337 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 ATP6V1G1O75348 118 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 FBXO24O75426 580 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 ACTL6BO94805 426 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 IGHV1-69P01742 117 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 SULT1A2P50226 295 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 ERHP84090 104 aaKnown RBP12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 LRRC75BQ2VPJ9 315 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 BSXQ3C1V8 233 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 METTL1Q9UBP6 276 aaKnown RBP12.64□□□□□ -0.39
PIK3C2A-203ENST00000531428 UMAD1C9J7I0 102 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 J3QLI3 93 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 NBR2O15453 112 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 CRLF1O75462 422 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 NDUFA3O95167 84 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 IGKV1D-33P01593 117 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 IGKV1-33P01594 117 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 SNRNP70P08621 437 aaKnown RBP12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 FAM106CPP0CH98 169 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 NPY1RP25929 384 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 ATP6V0CP27449 155 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 Q8N6K4 173 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 HSD17B11Q8NBQ5 300 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 C7orf69Q9H7B7 122 aa12.63□□□□□ -0.39
PIK3C2A-203ENST00000531428 UQCC1Q9NVA1 299 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms