RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 OR4X2Q8NGF9 303 aa12.54□□□□□ -0.4
BRK1-201ENST00000530758 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
BRK1-201ENST00000530758 ABHD5Q8WTS1 349 aa12.54□□□□□ -0.4
BRK1-201ENST00000530758 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
BRK1-201ENST00000530758 TMED3Q9Y3Q3 217 aa12.54□□□□□ -0.4
BRK1-201ENST00000530758 OR51B2Q9Y5P1 312 aa12.54□□□□□ -0.4
BRK1-201ENST00000530758 INS-IGF2F8WCM5 200 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 TRAPPC2P0DI81 140 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 TRAPPC2BP0DI82 140 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 SLC25A6P12236 298 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 RAB25P57735 213 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 SRSF4Q08170 494 aaKnown RBP12.53□□□□□ -0.4
BRK1-201ENST00000530758 ECSCRQ19T08 205 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 IZUMO4Q1ZYL8 232 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 OR52E5Q8NH55 327 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 COQ8AQ8NI60 647 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 FAM110DQ8TAY7 271 aaPredicted RBP12.53□□□□□ -0.4
BRK1-201ENST00000530758 CASTOR1Q8WTX7 329 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 QTRT1Q9BXR0 403 aaKnown RBP12.53□□□□□ -0.4
BRK1-201ENST00000530758 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
BRK1-201ENST00000530758 CACFD1Q9UGQ2 172 aa12.53□□□□□ -0.4
BRK1-201ENST00000530758 PKD1L1Q8TDX9 2849 aa12.52□□□□□ -0.4
BRK1-201ENST00000530758 A0A1B0GU03 582 aa12.52□□□□□ -0.41
BRK1-201ENST00000530758 A0A1W2PN81 502 aa12.52□□□□□ -0.41
BRK1-201ENST00000530758 IGLC7A0M8Q6 106 aa12.52□□□□□ -0.41
BRK1-201ENST00000530758 NPIPB5A8MRT5 1133 aa12.52□□□□□ -0.41
BRK1-201ENST00000530758 PITX3O75364 302 aa12.52□□□□□ -0.41
BRK1-201ENST00000530758 CHRNA7P36544 502 aa12.52□□□□□ -0.41
BRK1-201ENST00000530758 KIAA0141Q14154 515 aaPredicted RBP12.52□□□□□ -0.41
BRK1-201ENST00000530758 ZNF431Q8TF32 576 aaPredicted RBP12.52□□□□□ -0.41
BRK1-201ENST00000530758 PHB2Q99623 299 aa12.52□□□□□ -0.41
BRK1-201ENST00000530758 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 PRAF2O60831 178 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 OPN1MWP04001 364 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 OPN1MW2P0DN77 364 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 OPN1MW3P0DN78 364 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 CTRB1P17538 263 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 PSMB6P28072 239 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 RAB9AP51151 201 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 PRCDQ00LT1 54 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 CTRB2Q6GPI1 263 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 OR5T1Q8NG75 326 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 OR52B4Q8NGK2 314 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
BRK1-201ENST00000530758 FYTTD1Q96QD9 318 aaKnown RBP12.51□□□□□ -0.41
BRK1-201ENST00000530758 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
BRK1-201ENST00000530758 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 TRRAPQ9Y4A5 3859 aa12.51□□□□□ -0.41
BRK1-201ENST00000530758 TRBV9A0A0B4J1U6 114 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 ADARB2-AS1A8MUL3 147 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 SNRPGP15A8MWD9 76 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 SULT1A3P0DMM9 295 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 SULT1A4P0DMN0 295 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
BRK1-201ENST00000530758 WT1-ASQ06250 92 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 SMCO1Q147U7 214 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 CXorf66Q5JRM2 361 aaPredicted RBP12.5□□□□□ -0.41
BRK1-201ENST00000530758 NDUFA11Q86Y39 141 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 OR10W1Q8NGF6 305 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 UBE2E2Q96LR5 201 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 KLK15Q9H2R5 256 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 CACNG5Q9UF02 275 aa12.5□□□□□ -0.41
BRK1-201ENST00000530758 TSSC4Q9Y5U2 329 aaPredicted RBP12.5□□□□□ -0.41
BRK1-201ENST00000530758 TCRBV4S1A1TA0A5B7 111 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 DHFRP00374 187 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
BRK1-201ENST00000530758 AREGP15514 252 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 SPNP16150 400 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 SPCS3P61009 180 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 GGNBP1Q5YKI7 109 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 TMEM65Q6PI78 240 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 SEC22CQ9BRL7 303 aa12.49□□□□□ -0.41
BRK1-201ENST00000530758 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
BRK1-201ENST00000530758 HOXB5P09067 269 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 APELAP0DMC3 54 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 PF4V1P10720 104 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 RPL23AP62750 156 aaKnown RBP12.48□□□□□ -0.41
BRK1-201ENST00000530758 C12orf45Q8N5I9 185 aaPredicted RBP12.48□□□□□ -0.41
BRK1-201ENST00000530758 OR2C3Q8N628 320 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 C11orf44Q8N8P7 122 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 ZNF114Q8NC26 417 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 FANCD2OSQ96PS1 177 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 GPN1Q9HCN4 374 aaPredicted RBP12.48□□□□□ -0.41
BRK1-201ENST00000530758 HSPB7Q9UBY9 170 aa12.48□□□□□ -0.41
BRK1-201ENST00000530758 MGAM2Q2M2H8 2515 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 FAM90A26D6RGX4 464 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 ADAP1O75689 374 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 IFNA21P01568 189 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 IFNA17P01571 189 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 OR13C7P0DN81 318 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 RGS21Q2M5E4 152 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
BRK1-201ENST00000530758 PDCD10Q9BUL8 212 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 CMYA5Q8N3K9 4069 aa12.47□□□□□ -0.41
BRK1-201ENST00000530758 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
BRK1-201ENST00000530758 A0A0G2JLM5 398 aa12.46□□□□□ -0.41
BRK1-201ENST00000530758 HIST1H1BP16401 226 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms