RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 SLC17A3O00476 420 aa15.96■□□□□ 0.14
PCF11-203ENST00000530304 RNF224P0DH78 156 aa15.96■□□□□ 0.14
PCF11-203ENST00000530304 GNG10P50151 68 aa15.96■□□□□ 0.14
PCF11-203ENST00000530304 ZNF90Q03938 601 aa15.96■□□□□ 0.14
PCF11-203ENST00000530304 FAM222BQ8WU58 562 aa15.96■□□□□ 0.14
PCF11-203ENST00000530304 C11orf52Q96A22 123 aa15.96■□□□□ 0.14
PCF11-203ENST00000530304 MISP3Q96FF7 219 aa15.96■□□□□ 0.14
PCF11-203ENST00000530304 ACTL6BO94805 426 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 SNRPCP09234 159 aaKnown RBP15.95■□□□□ 0.14
PCF11-203ENST00000530304 LINC00869P0C866 280 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 MIR17HGQ75NE6 70 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 ZNF439Q8NDP4 499 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 ADTRPQ96IZ2 230 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 FKBP11Q9NYL4 201 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 IL36BQ9NZH7 164 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 IGLV3-9A0A075B6K5 115 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 DEFB108BQ8NET1 73 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 ZCCHC14Q8WYQ9 949 aaKnown RBP15.95■□□□□ 0.14
PCF11-203ENST00000530304 FAM122AQ96E09 287 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 UHRF2Q96PU4 802 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 GCM1Q9NP62 436 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 RNF7Q9UBF6 113 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 TP53TG5Q9Y2B4 290 aa15.95■□□□□ 0.14
PCF11-203ENST00000530304 BOD1L1Q8NFC6 3051 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 GRIFINA4D1Z8 144 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 J3QR06 171 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 SCGB1D1O95968 90 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 GATA4P43694 442 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 SSTP61278 116 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 POU2AF1Q16633 256 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 BEND2Q8NDZ0 799 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 CORO2AQ92828 525 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 SPAARA0A1B0GVQ0 90 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 C9JCJ5 164 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 CBLN1P23435 193 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 STUMQ69YW2 141 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 DEFB124Q8NES8 71 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 EAF1Q96JC9 268 aaPredicted RBP15.94■□□□□ 0.14
PCF11-203ENST00000530304 LRFN3Q9BTN0 628 aa15.94■□□□□ 0.14
PCF11-203ENST00000530304 TANC2Q9HCD6 1990 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 FNDC10F2Z333 226 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 MMP23AO75900 390 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 FTH1P19P0C7X4 201 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 NDUFB7P17568 137 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 TAS2R60P59551 318 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 LBHQ53QV2 105 aaPredicted RBP15.93■□□□□ 0.14
PCF11-203ENST00000530304 PIP4P1Q86T03 277 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 RPRMLQ8N4K4 120 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 C2orf88Q9BSF0 95 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 PLEKHA3Q9HB20 300 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 PRNDQ9UKY0 176 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 IGKV1-16P04430 117 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 MOB3BQ86TA1 216 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 SLC45A2Q9UMX9 530 aa15.93■□□□□ 0.14
PCF11-203ENST00000530304 AREGP15514 252 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 RAB4BP61018 213 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 PRCDQ00LT1 54 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 PSG5Q15238 335 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 MS4A10Q96PG2 267 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 GAFA1Q96PS6 74 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 CCL13Q99616 98 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 NABP2Q9BQ15 211 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 LY96Q9Y6Y9 160 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 TRAV9-1A0A075B6T8 112 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 SRRM4A7MD48 611 aaKnown RBP15.92■□□□□ 0.14
PCF11-203ENST00000530304 A8MXE2 369 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 CT45A6P0DMU7 189 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 CT45A5P0DMU8 189 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 CT45A7P0DMV0 189 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 SELENOTP62341 195 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 SFXN3Q9BWM7 321 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 ZNF257Q9Y2Q1 563 aa15.92■□□□□ 0.14
PCF11-203ENST00000530304 IGKV1OR2-108A0A075B7D4 117 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 UPK2O00526 184 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 TNFAIP6P98066 277 aaPredicted RBP15.91■□□□□ 0.14
PCF11-203ENST00000530304 OR5I1Q13606 314 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 USF2Q15853 346 aaPredicted RBP15.91■□□□□ 0.14
PCF11-203ENST00000530304 ZNRD1Q9P1U0 126 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 SLC25A10Q9UBX3 287 aaPredicted RBP15.91■□□□□ 0.14
PCF11-203ENST00000530304 TP53TG3Q9ULZ0 132 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 RAI1Q7Z5J4 1906 aaPredicted RBP15.91■□□□□ 0.14
PCF11-203ENST00000530304 FOSL1P15407 271 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 ERVFC1-1P60608 527 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 FAM216BQ8N7L0 139 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 CMTM2Q8TAZ6 248 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 MRPL18Q9H0U6 180 aaKnown RBP15.91■□□□□ 0.14
PCF11-203ENST00000530304 FAM215AQ9Y5M1 114 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 ICE1Q9Y2F5 2266 aa15.91■□□□□ 0.14
PCF11-203ENST00000530304 IGHV1-46P01743 117 aa15.9■□□□□ 0.14
PCF11-203ENST00000530304 LGALS4P56470 323 aa15.9■□□□□ 0.14
PCF11-203ENST00000530304 IL19Q9UHD0 177 aa15.9■□□□□ 0.14
PCF11-203ENST00000530304 NAGKQ9UJ70 344 aa15.9■□□□□ 0.14
PCF11-203ENST00000530304 YLPM1P49750 1951 aaKnown RBP15.9■□□□□ 0.14
PCF11-203ENST00000530304 GATA2P23769 480 aaPredicted RBP15.9■□□□□ 0.14
PCF11-203ENST00000530304 CRYBB3P26998 211 aa15.9■□□□□ 0.14
PCF11-203ENST00000530304 ZADH2Q8N4Q0 377 aa15.9■□□□□ 0.14
PCF11-203ENST00000530304 SNRNP40Q96DI7 357 aaKnown RBP15.9■□□□□ 0.14
PCF11-203ENST00000530304 SLC35D1Q9NTN3 355 aa15.9■□□□□ 0.14
PCF11-203ENST00000530304 TEX50A0A1B0GTY4 177 aa15.89■□□□□ 0.13
PCF11-203ENST00000530304 HELTA6NFD8 242 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms