RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 HLA-DQB1P01920 261 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 HIST1H1DP16402 221 aaKnown RBP6.58□□□□□ -1.36
VPS11-203ENST00000529545 TFPI2P48307 235 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 IRF3Q14653 427 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 ARL6IP1Q15041 203 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 SPHARQ15513 63 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 TRAM1Q15629 374 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 ZNF66Q6ZN08 573 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 GFI1Q99684 422 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 SRSF8Q9BRL6 282 aaKnown RBP6.58□□□□□ -1.36
VPS11-203ENST00000529545 HRH4Q9H3N8 390 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 C8orf4Q9NR00 106 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 BET1LQ9NYM9 111 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 TAS2R8Q9NYW2 309 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 V9GY05 133 aa6.58□□□□□ -1.36
VPS11-203ENST00000529545 TRAV10A0A0B4J240 114 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 C15orf62A8K5M9 175 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 ZNF207O43670 478 aaKnown RBP6.57□□□□□ -1.36
VPS11-203ENST00000529545 NFYAP23511 347 aaPredicted RBP6.57□□□□□ -1.36
VPS11-203ENST00000529545 DTYMKP23919 212 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 PSMA1P25786 263 aaKnown RBP6.57□□□□□ -1.36
VPS11-203ENST00000529545 CALRP27797 417 aaKnown RBP6.57□□□□□ -1.36
VPS11-203ENST00000529545 OR2B8PP59922 312 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 HES5Q5TA89 166 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 LIPKQ5VXJ0 399 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 THOC7Q6I9Y2 204 aaKnown RBP6.57□□□□□ -1.36
VPS11-203ENST00000529545 SLC25A24Q6NUK1 477 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 HSD17B13Q7Z5P4 300 aaPredicted RBP6.57□□□□□ -1.36
VPS11-203ENST00000529545 ATP6V0BQ99437 205 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
VPS11-203ENST00000529545 IGKV3-7A0A075B6H7 116 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 IGHV4-4A0A075B6R2 117 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 IGHV3OR16-8A0A075B7F1 116 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 IGKV1D-8A0A087WSZ0 117 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 IGLC7A0M8Q6 106 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 PTGES3LE9PB15 166 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 P0DMU3 169 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 FAM231AP0DMU4 169 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 FAM231CP0DMU5 169 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 OR13C7P0DN81 318 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 HLA-DMBP28068 263 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 PLA2G7Q13093 441 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 ZNF124Q15973 351 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 TIMM50Q3ZCQ8 353 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 Q56UQ5 140 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 PVRIGQ6DKI7 326 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 CNIH2Q6PI25 160 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 TMEM91Q6ZNR0 172 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 PACRGLQ8N7B6 248 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 POM121L12Q8N7R1 296 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 GDPD1Q8N9F7 314 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 UBAC2Q8NBM4 344 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 RNF2Q99496 336 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 RNF126Q9BV68 326 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 RHPN1-AS1Q9BWJ2 59 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 QTRT1Q9BXR0 403 aaKnown RBP6.56□□□□□ -1.36
VPS11-203ENST00000529545 FKBP14Q9NWM8 211 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 C21orf62Q9NYP8 219 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 ETV7Q9Y603 341 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
VPS11-203ENST00000529545 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
VPS11-203ENST00000529545 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
VPS11-203ENST00000529545 IGKV1D-13A0A0B4J2D9 117 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 IGHV7-4-1A0A0J9YVY3 117 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 CGB1A6NKQ9 187 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 C15orf61A6NNL5 157 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 M0R2N4 97 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 UPK2O00526 184 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 PDCD5O14737 125 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 YIF1AO95070 293 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 IGLV2-14P01704 120 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 CD5P06127 495 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 EIF4EP06730 217 aaKnown RBP6.55□□□□□ -1.36
VPS11-203ENST00000529545 GNAO1P09471 354 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 HSMCR30P0CW71 290 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 TRAPPC2P0DI81 140 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 TRAPPC2BP0DI82 140 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 IGKV1-13P0DP09 117 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 TAS2R31P59538 309 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 RELQ04864 619 aaPredicted RBP6.55□□□□□ -1.36
VPS11-203ENST00000529545 LAIR2Q6ISS4 152 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 SPAG16Q8N0X2 631 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 GBGT1Q8N5D6 347 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 DMBX1Q8NFW5 382 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 CHRDL1Q9BU40 450 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 CCDC90BQ9GZT6 254 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 DCSTAMPQ9H295 470 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
VPS11-203ENST00000529545 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 DNASE2O00115 360 aaPredicted RBP6.54□□□□□ -1.36
VPS11-203ENST00000529545 CHEK1O14757 476 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 NUPL2O15504 423 aaKnown RBP6.54□□□□□ -1.36
VPS11-203ENST00000529545 RBFOX2O43251 390 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS11-203ENST00000529545 DFFBO76075 338 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 HPRT1P00492 218 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 SERPINE2P07093 398 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 MIFP14174 115 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms