RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 EIF4EBP1Q13541 118 aaPredicted RBP4.42□□□□□ -1.7
NUP98-215ENST00000529063 RAB11BQ15907 218 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 OR2B11Q5JQS5 317 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 CTRB2Q6GPI1 263 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 MMD2Q8IY49 270 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 PUSL1Q8N0Z8 303 aaKnown RBP4.42□□□□□ -1.7
NUP98-215ENST00000529063 MS4A15Q8N5U1 240 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 OR56B1Q8NGI3 324 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 OR10J5Q8NHC4 309 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 PHLDA1Q8WV24 401 aaPredicted RBP4.42□□□□□ -1.7
NUP98-215ENST00000529063 RNF183Q96D59 192 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 ZNF414Q96IQ9 312 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 ADTRPQ96IZ2 230 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 HRH4Q9H3N8 390 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 PLGRKTQ9HBL7 147 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 LRP1BQ9NZR2 4599 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 UBQLN2Q9UHD9 624 aa4.42□□□□□ -1.7
NUP98-215ENST00000529063 ELF5Q9UKW6 265 aaPredicted RBP4.42□□□□□ -1.7
NUP98-215ENST00000529063 AK6Q9Y3D8 172 aaKnown RBP4.42□□□□□ -1.7
NUP98-215ENST00000529063 TRAV25A0A0B4J276 109 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 IGKV1D-13A0A0B4J2D9 117 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 IGHV3-35A0A0C4DH35 117 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 ZNF320A2RRD8 509 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 DENRO43583 198 aaKnown RBP4.41□□□□□ -1.7
NUP98-215ENST00000529063 FCGR3BO75015 233 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 REG1AP05451 166 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 IGKV1-13P0DP09 117 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 GNB3P16520 340 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 ZNF182P17025 639 aaPredicted RBP4.41□□□□□ -1.7
NUP98-215ENST00000529063 PSMB6P28072 239 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 RPL27AP46776 148 aaKnown RBP4.41□□□□□ -1.7
NUP98-215ENST00000529063 APOC4P55056 127 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 C2orf76Q3KRA6 126 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 LIPKQ5VXJ0 399 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 Q6ZS49 121 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 KCTD9Q7L273 389 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 SLC25A42Q86VD7 318 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 CADM3Q8N126 398 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 DHRSXQ8N5I4 330 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 BPIFB6Q8NFQ5 453 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 OR1L6Q8NGR2 347 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 TMEM167AQ8TBQ9 72 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 TMEM203Q969S6 136 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 FAM3DQ96BQ1 224 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 MND1Q9BWT6 205 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 ZNF436Q9C0F3 470 aaPredicted RBP4.41□□□□□ -1.7
NUP98-215ENST00000529063 SLC2A9Q9NRM0 540 aa4.41□□□□□ -1.7
NUP98-215ENST00000529063 KLK5Q9Y337 293 aaPredicted RBP4.41□□□□□ -1.7
NUP98-215ENST00000529063 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
NUP98-215ENST00000529063 KIR2DL5BA0A0G2JN68 375 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 KIR2DL5BA0A0G2JPC4 375 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 IGLC7A0M8Q6 106 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 J3QRK9 145 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 EBAG9O00559 213 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 CREBL2O60519 120 aaPredicted RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 HLA-DQB1P01920 261 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 HNRNPCP07910 306 aaKnown RBP eCLIP4.4□□□□□ -1.718e-7■■■■□ 21.3
NUP98-215ENST00000529063 HIST1H1DP16402 221 aaKnown RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 RPL35AP18077 110 aaKnown RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 GPR183P32249 361 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 OR10A3P58181 314 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 TPBGQ13641 420 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 ARFRP1Q13795 201 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 SPHARQ15513 63 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 ANKRD55Q3KP44 614 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 FAM106AQ4KMX7 169 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 HES5Q5TA89 166 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 OR4A47Q6IF82 309 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 C8orf59Q8N0T1 100 aaPredicted RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 KIR2DL5AQ8N109 375 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 PACRGLQ8N7B6 248 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 ZNF645Q8N7E2 425 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 OR10R2Q8NGX6 335 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 KIR2DL5BQ8NHK3 375 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 ZNF502Q8TBZ5 544 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 TMEM190Q8WZ59 177 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 MARC2Q969Z3 335 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 EEF1AKMT3Q96AZ1 226 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 RAB3CQ96E17 227 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 C8orf49Q96NF6 230 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 OR2A7Q96R45 310 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 SPAG8Q99932 426 aaPredicted RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 GINS4Q9BRT9 223 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 OR51E2Q9H255 320 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 C5orf66Q9H5L9 145 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 MAP6D1Q9H9H5 199 aa4.4□□□□□ -1.71
NUP98-215ENST00000529063 MRPL27Q9P0M9 148 aaKnown RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 RBMX2Q9Y388 322 aaKnown RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 RBM7Q9Y580 266 aaKnown RBP4.4□□□□□ -1.71
NUP98-215ENST00000529063 A0A075B6Q4 140 aa4.39□□□□□ -1.71
NUP98-215ENST00000529063 TRBV7-1A0A0A6YYK4 115 aa4.39□□□□□ -1.71
NUP98-215ENST00000529063 TRAV3A0A0B4J244 114 aa4.39□□□□□ -1.71
NUP98-215ENST00000529063 DBX1A6NMT0 343 aa4.39□□□□□ -1.71
NUP98-215ENST00000529063 GALP22466 123 aa4.39□□□□□ -1.71
NUP98-215ENST00000529063 NFYAP23511 347 aaPredicted RBP4.39□□□□□ -1.71
NUP98-215ENST00000529063 CALRP27797 417 aaKnown RBP4.39□□□□□ -1.71
NUP98-215ENST00000529063 MAS1LP35410 378 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms