RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 NEIL1Q96FI4 390 aaPredicted RBP9.61□□□□□ -0.87
USF1-208ENST00000528768 RCC1LQ96I51 464 aaKnown RBP9.61□□□□□ -0.87
USF1-208ENST00000528768 RHOVQ96L33 236 aa9.61□□□□□ -0.87
USF1-208ENST00000528768 MANBALQ9NQG1 85 aa9.61□□□□□ -0.87
USF1-208ENST00000528768 TCF19Q9Y242 345 aa9.61□□□□□ -0.87
USF1-208ENST00000528768 PRELID1Q9Y255 219 aa9.61□□□□□ -0.87
USF1-208ENST00000528768 ZNF257Q9Y2Q1 563 aa9.61□□□□□ -0.87
USF1-208ENST00000528768 CUBNO60494 3623 aa9.61□□□□□ -0.87
USF1-208ENST00000528768 USF3Q68DE3 2245 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 TRBV23-1A0A0A0MS06 115 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 C15orf62A8K5M9 175 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 FSTL3O95633 263 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 MT-ND4LP03901 98 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 IFNA4P05014 189 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 ARG1P05089 322 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 PSMB3P49720 205 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
USF1-208ENST00000528768 SLC35E3Q7Z769 313 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 LINC00311Q8N616 119 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 OR10G9Q8NGN4 311 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 OR10G7Q8NGN6 311 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 OSR1Q8TAX0 266 aaPredicted RBP9.6□□□□□ -0.87
USF1-208ENST00000528768 LEAP2Q969E1 77 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 TMEM186Q96B77 213 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 RARRES2Q99969 163 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 NPCDR1Q9BY65 106 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 WDR83OSQ9Y284 106 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 PUS1Q9Y606 427 aaKnown RBP eCLIP9.6□□□□□ -0.87
USF1-208ENST00000528768 RFNGQ9Y644 331 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.6□□□□□ -0.872e-8■■■■■ 31.6
USF1-208ENST00000528768 MEGF8Q7Z7M0 2845 aa9.6□□□□□ -0.87
USF1-208ENST00000528768 ROS1P08922 2347 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.59□□□□□ -0.87
USF1-208ENST00000528768 A0A1W2PPE3 182 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 SMCO3A2RU48 225 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 ZFP92A6NM28 416 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 FNDC10F2Z333 226 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 IGHV3-7P01780 117 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 VDAC2P45880 294 aaPredicted RBP9.59□□□□□ -0.87
USF1-208ENST00000528768 CEBPGP53567 150 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 RAB5BP61020 215 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 RNF212Q495C1 297 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 TMEM200BQ69YZ2 307 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 OR4A47Q6IF82 309 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 DUX4L9Q6RFH8 374 aaPredicted RBP9.59□□□□□ -0.87
USF1-208ENST00000528768 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 TCF23Q7RTU1 214 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 MRPL41Q8IXM3 137 aaKnown RBP9.59□□□□□ -0.87
USF1-208ENST00000528768 ZNF383Q8NA42 475 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 MAPK1IP1LQ8NDC0 245 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 OR13D1Q8NGV5 346 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 OR10X1Q8NGY0 326 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 OR4A5Q8NH83 315 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 VSTM2AQ8TAG5 236 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 PLEKHA3Q9HB20 300 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 SIRT7Q9NRC8 400 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 TMEM14BQ9NUH8 114 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 OR51B2Q9Y5P1 312 aa9.59□□□□□ -0.87
USF1-208ENST00000528768 A0A087WWC5 75 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 hCG_1809904A0A1W2PP81 198 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 A0A1W2PPE2 198 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 A0A1W2PPV4 95 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 A0A1W2PR64 198 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 A0A1W2PRV1 198 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 C1orf196B1AJZ1 125 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 H3BQ15 152 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 UPK2O00526 184 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 KBTBD11O94819 623 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 FOLR2P14207 255 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 NPY1RP25929 384 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 LOXP28300 417 aaPredicted RBP9.58□□□□□ -0.88
USF1-208ENST00000528768 MC5RP33032 325 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 OPRK1P41145 380 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 RAB13P51153 203 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 SPINK9Q5DT21 86 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 SLC24A4Q8NFF2 622 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 OR5B3Q8NH48 314 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 OR9G1Q8NH87 305 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 TNFRSF14Q92956 283 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 NPVFQ9HCQ7 196 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 BET1LQ9NYM9 111 aa9.58□□□□□ -0.88
USF1-208ENST00000528768 DYSFO75923 2080 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 CXorf65A6NEN9 183 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 J3QR06 171 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 DVL1O14640 695 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 TNFRSF13BO14836 293 aaPredicted RBP9.57□□□□□ -0.88
USF1-208ENST00000528768 CT45A6P0DMU7 189 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 CT45A5P0DMU8 189 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 CT45A7P0DMV0 189 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 CDC34P49427 236 aaPredicted RBP9.57□□□□□ -0.88
USF1-208ENST00000528768 PPOXP50336 477 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 PRRX1P54821 245 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 LINC00205P59089 165 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 PDPNQ86YL7 162 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 VKORC1L1Q8N0U8 176 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 MUC15Q8N387 334 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 CYB561D1Q8N8Q1 229 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 NANPQ8TBE9 248 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 ZNF596Q8TC21 504 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 PCGF1Q9BSM1 259 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms