RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TBPP20226 339 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 PIGPP57054 158 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 MRPS10P82664 201 aaKnown RBP10.92□□□□□ -0.66
CAPN1-216ENST00000528739 THOC7Q6I9Y2 204 aaKnown RBP10.92□□□□□ -0.66
CAPN1-216ENST00000528739 STEAP1BQ6NZ63 245 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 ZFAND1Q8TCF1 268 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 DYNC2LI1Q8TCX1 351 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 DYNLRB2Q8TF09 96 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 ISOC1Q96CN7 298 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 CXorf58Q96LI9 332 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 FANCD2OSQ96PS1 177 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 PRNDQ9UKY0 176 aa10.92□□□□□ -0.66
CAPN1-216ENST00000528739 IGLC7A0M8Q6 106 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 DISC1C4P0D8 188 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 TRIM16LQ309B1 348 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 CCDC71LQ8N9Z2 235 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 OR4D10Q8NGI6 311 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 RNASE11Q8TAA1 199 aaKnown RBP10.91□□□□□ -0.66
CAPN1-216ENST00000528739 MRGPRFQ96AM1 343 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 TMEM56Q96MV1 263 aa10.91□□□□□ -0.66
CAPN1-216ENST00000528739 SRSF8Q9BRL6 282 aaKnown RBP10.91□□□□□ -0.66
CAPN1-216ENST00000528739 IGLV11-55A0A075B6I3 123 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 TRBV7-1A0A0A6YYK4 115 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 MFSD2BA6NFX1 497 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 H3BMQ9 156 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 CLEC3BP05452 202 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 CSN3P07498 182 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 AKR1C2P52895 323 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 MEF2DQ14814 521 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 FAM106AQ4KMX7 169 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 FAAP20Q6NZ36 180 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 HSD17B13Q7Z5P4 300 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-216ENST00000528739 TERB2Q8NHR7 220 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 MCFD2Q8NI22 146 aa10.9□□□□□ -0.66
CAPN1-216ENST00000528739 LSM10Q969L4 123 aaKnown RBP10.9□□□□□ -0.66
CAPN1-216ENST00000528739 ZNF486Q96H40 463 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-216ENST00000528739 C14orf166Q9Y224 244 aaKnown RBP10.9□□□□□ -0.66
CAPN1-216ENST00000528739 C3orf85A0A1B0GTC6 90 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 FABP12A6NFH5 140 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 ATG12O94817 140 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 NHLRC4P0CG21 123 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-216ENST00000528739 GPR183P32249 361 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 SP6Q3SY56 376 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 LCN12Q6JVE5 192 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 PLET1Q6UQ28 207 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 IL34Q6ZMJ4 242 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 GTSCR1Q86UQ5 136 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 LHFPL1Q86WI0 220 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 SGPP2Q8IWX5 399 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 GDPD1Q8N9F7 314 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 UBAC2Q8NBM4 344 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 OR5B3Q8NH48 314 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 MARCH1Q8TCQ1 289 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 NDUFA4L2Q9NRX3 87 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-216ENST00000528739 RABL2AQ9UBK7 228 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-216ENST00000528739 RABL2BQ9UNT1 228 aa10.89□□□□□ -0.67
CAPN1-216ENST00000528739 TNCP24821 2201 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 TEX13DA0A0J9YY54 714 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-216ENST00000528739 C15orf61A6NNL5 157 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 CD74P04233 296 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 FGF2P09038 288 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 AKAIN1P0CW23 69 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 RND3P61587 244 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 SSBP1Q04837 148 aaKnown RBP10.88□□□□□ -0.67
CAPN1-216ENST00000528739 WT1-ASQ06250 92 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 Q8N402 240 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 OR13C8Q8NGS7 320 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 SMIM4Q8WVI0 70 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 SEC22AQ96IW7 307 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 CCDC140Q96MF4 163 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 PDCD10Q9BUL8 212 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 RSL24D1Q9UHA3 163 aaKnown RBP10.88□□□□□ -0.67
CAPN1-216ENST00000528739 SELENOKQ9Y6D0 94 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 TGP01266 2768 aa10.88□□□□□ -0.67
CAPN1-216ENST00000528739 DBX1A6NMT0 343 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 CTDSPLO15194 276 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 IGKV1-39P01597 117 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 IGKV1D-39P04432 117 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 FOLR2P14207 255 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 PTBP1P26599 531 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN1-216ENST00000528739 TNFSF8P32971 234 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 ERHP84090 104 aaKnown RBP10.87□□□□□ -0.67
CAPN1-216ENST00000528739 GUCA2BQ16661 112 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 IZUMO4Q1ZYL8 232 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 Q56UQ5 140 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 SPINK9Q5DT21 86 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 OR1L6Q8NGR2 347 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 RRNAD1Q96FB5 475 aaKnown RBP10.87□□□□□ -0.67
CAPN1-216ENST00000528739 MISP3Q96FF7 219 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 TP53RKQ96S44 253 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 TUBA4BQ9H853 241 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 MCUBQ9NWR8 336 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 F11RQ9Y624 299 aaKnown RBP10.87□□□□□ -0.67
CAPN1-216ENST00000528739 CEPT1Q9Y6K0 416 aa10.87□□□□□ -0.67
CAPN1-216ENST00000528739 OR2T8A6NH00 312 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms