RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SMIM4Q8WVI0 70 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 CXorf58Q96LI9 332 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 SLIRPQ9GZT3 109 aaKnown RBP9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 NDUFA4L2Q9NRX3 87 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 THYN1Q9P016 225 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 PEMTQ9UBM1 199 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 PRNDQ9UKY0 176 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 DMRT1Q9Y5R6 373 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 DNAH3Q8TD57 4116 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 TRBV7-1A0A0A6YYK4 115 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 CYB5BO43169 146 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 GGCTO75223 188 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 CSN3P07498 182 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 NHLRC4P0CG21 123 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 GP9P14770 177 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 PGAM2P15259 253 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 IL18Q14116 193 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 MEF2DQ14814 521 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 GPHB5Q86YW7 130 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 EEF1AKMT3Q96AZ1 226 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 SEC22AQ96IW7 307 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 NXF2Q9GZY0 626 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR51B2Q9Y5P1 312 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 SMAD5-AS1Q9Y6J3 95 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 CEPT1Q9Y6K0 416 aa9.24□□□□□ -0.93
TRAPPC4-209ENST00000528230 H0Y980 276 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 LGALS9O00182 355 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 GSTZ1O43708 216 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 B3GALNT1O75752 331 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 REG1AP05451 166 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 SERPINE2P07093 398 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 MECP2P51608 486 aaKnown RBP9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 PIGPP57054 158 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 C19orf35Q6ZS72 473 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 H2BFWTQ7Z2G1 175 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 GDPD1Q8N9F7 314 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 CCDC71LQ8N9Z2 235 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR10W1Q8NGF6 305 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR4D10Q8NGI6 311 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR1L6Q8NGR2 347 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 LSM10Q969L4 123 aaKnown RBP9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 TMEM56Q96MV1 263 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 SOSTQ9BQB4 213 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 C6orf62Q9GZU0 229 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 TMEM14BQ9NUH8 114 aa9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 RSL24D1Q9UHA3 163 aaKnown RBP9.23□□□□□ -0.93
TRAPPC4-209ENST00000528230 C15orf61A6NNL5 157 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 DISC1C4P0D8 188 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 ATG12O94817 140 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 IGKV1-39P01597 117 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 IGKV1D-39P04432 117 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 CTSDP07339 412 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR13C7P0DN81 318 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 TNFSF8P32971 234 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 ARL3P36405 182 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 WT1-ASQ06250 92 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 SURF2Q15527 256 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 SCGB2B2Q4G0G5 96 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 CLEC19AQ6UXS0 136 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR2K2Q8NGT1 345 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 MCFD2Q8NI22 146 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 VN1R17PQ8TDU5 208 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 CCDC140Q96MF4 163 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 ATP6V0BQ99437 205 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 COPZ2Q9P299 210 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 NSG2Q9Y328 171 aa9.22□□□□□ -0.93
TRAPPC4-209ENST00000528230 C3orf85A0A1B0GTC6 90 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 FABP12A6NFH5 140 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 PPP5D1E7EU14 171 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 OR2C1O95371 312 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 CLEC3BP05452 202 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 AKAIN1P0CW23 69 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 PI3P19957 117 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 PPP5CP53041 499 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 FAM106AQ4KMX7 169 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 SLC25A24Q6NUK1 477 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 Q8N402 240 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 OR13C8Q8NGS7 320 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 OR4A16Q8NH70 328 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 ZNF502Q8TBZ5 544 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 MARCH1Q8TCQ1 289 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 HINT2Q9BX68 163 aa9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 F11RQ9Y624 299 aaKnown RBP9.21□□□□□ -0.94
TRAPPC4-209ENST00000528230 ANKRD20A5PA0PJZ0 165 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 MFSD2BA6NFX1 497 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 ZNF701M0R085 212 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 IGHV3-23P01764 117 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 UCP1P25874 307 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 HSPE1P61604 102 aaKnown RBP9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 LCN12Q6JVE5 192 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 TP53RKQ96S44 253 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 PRRT1Q99946 306 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 GPR132Q9UNW8 380 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 S4R3C0 116 aa9.2□□□□□ -0.94
TRAPPC4-209ENST00000528230 CCDC160A6NGH7 325 aa9.19□□□□□ -0.94
TRAPPC4-209ENST00000528230 C2orf70A6NJV1 201 aa9.19□□□□□ -0.94
TRAPPC4-209ENST00000528230 A8MZ25 164 aa9.19□□□□□ -0.94
TRAPPC4-209ENST00000528230 HLA-AP01891 365 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms