RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 UCP3P55916 312 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 SCGB2B2Q4G0G5 96 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 SBSPONQ8IVN8 264 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 SGPP2Q8IWX5 399 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 OR4D10Q8NGI6 311 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 CXorf58Q96LI9 332 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 THYN1Q9P016 225 aa11.81□□□□□ -0.52
CAPN1-213ENST00000527897 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 RAB3DO95716 219 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 CLEC3BP05452 202 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 IGHV4-30-4P0DP06 118 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 GPR183P32249 361 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 TAS2R19P59542 299 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 WT1-ASQ06250 92 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 IL18Q14116 193 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 THOC7Q6I9Y2 204 aaKnown RBP11.8□□□□□ -0.52
CAPN1-213ENST00000527897 H2BFWTQ7Z2G1 175 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 Q8N402 240 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 GDPD1Q8N9F7 314 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 LSM10Q969L4 123 aaKnown RBP11.8□□□□□ -0.52
CAPN1-213ENST00000527897 MRGPRFQ96AM1 343 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 WWC2-AS2Q96NR7 200 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 TSC22D3Q99576 134 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 SRSF8Q9BRL6 282 aaKnown RBP11.8□□□□□ -0.52
CAPN1-213ENST00000527897 C6orf62Q9GZU0 229 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-213ENST00000527897 PRNDQ9UKY0 176 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 DMRT1Q9Y5R6 373 aa11.8□□□□□ -0.52
CAPN1-213ENST00000527897 IGHV3-35A0A0C4DH35 117 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 C2orf70A6NJV1 201 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 GABARAPH6UMI1 98 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 FGF2P09038 288 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 TBPP20226 339 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 RPL5P46777 297 aaKnown RBP11.79□□□□□ -0.52
CAPN1-213ENST00000527897 TMBIM6P55061 237 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 PIGPP57054 158 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 CD300EQ496F6 205 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-213ENST00000527897 FAM106AQ4KMX7 169 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 FAAP20Q6NZ36 180 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 STEAP1BQ6NZ63 245 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 HSD17B13Q7Z5P4 300 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-213ENST00000527897 GTSCR1Q86UQ5 136 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 Q8N1Y9 231 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 TMEM229BQ8NBD8 167 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 DYNC2LI1Q8TCX1 351 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 CACNG8Q8WXS5 425 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 DIRAS2Q96HU8 199 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 TMEM56Q96MV1 263 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 NDUFA4L2Q9NRX3 87 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 FKBP11Q9NYL4 201 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 SIGLEC8Q9NYZ4 499 aa11.79□□□□□ -0.52
CAPN1-213ENST00000527897 CCDC59Q9P031 241 aaKnown RBP11.79□□□□□ -0.52
CAPN1-213ENST00000527897 DBX1A6NMT0 343 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 C15orf61A6NNL5 157 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 TPPPO94811 219 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 IGKV1-39P01597 117 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 IGKV1D-39P04432 117 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 FOLR2P14207 255 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 PLET1Q6UQ28 207 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 SEC22AQ96IW7 307 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 FAM212BQ9NTI7 297 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-213ENST00000527897 COPZ2Q9P299 210 aa11.78□□□□□ -0.52
CAPN1-213ENST00000527897 CCDC160A6NGH7 325 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 OR2T8A6NH00 312 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 RND3P61587 244 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 KLK9Q2XQG4 91 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 TRIM16LQ309B1 348 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 GPHB5Q86YW7 130 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 UBAC2Q8NBM4 344 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 OR13C8Q8NGS7 320 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 OR5B3Q8NH48 314 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 TERB2Q8NHR7 220 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 ZNF502Q8TBZ5 544 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 MARCH1Q8TCQ1 289 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 ZNF486Q96H40 463 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-213ENST00000527897 TP53RKQ96S44 253 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 BCL7BQ9BQE9 202 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 TUBA4BQ9H853 241 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 ZMAT4Q9H898 229 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 TMEM14BQ9NUH8 114 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 KLK9Q9UKQ9 250 aa11.77□□□□□ -0.53
CAPN1-213ENST00000527897 F11RQ9Y624 299 aaKnown RBP11.77□□□□□ -0.53
CAPN1-213ENST00000527897 HUWE1Q7Z6Z7 4374 aaKnown RBP11.77□□□□□ -0.53
CAPN1-213ENST00000527897 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 H3BMQ9 156 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 LGALS9O00182 355 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 CD74P04233 296 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.53
CAPN1-213ENST00000527897 AKR1C2P52895 323 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 MFAP2P55001 183 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 CD81P60033 236 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 MRPS10P82664 201 aaKnown RBP11.76□□□□□ -0.53
CAPN1-213ENST00000527897 SP6Q3SY56 376 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms