RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 HEYLQ9NQ87 328 aaPredicted RBP13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 GSN-AS1Q9NRJ2 163 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 PRNDQ9UKY0 176 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 CEBPGP53567 150 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 PDPNQ86YL7 162 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 OR4C13Q8NGP0 309 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 RPRMQ9NS64 109 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 TMEM14BQ9NUH8 114 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 GNG13Q9P2W3 67 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 VAX2Q9UIW0 290 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 LOC105371242A0A075B767 164 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 ELOA3CA0A087WX78 387 aaPredicted RBP13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 NDUFS7O75251 213 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 MC5RP33032 325 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 RND2P52198 227 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 ZNF674Q2M3X9 581 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 HARBI1Q96MB7 349 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 BBC3Q96PG8 261 aaPredicted RBP13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 TCF19Q9Y242 345 aa13.17□□□□□ -0.3
SNRNP35-204ENST00000527158 SRRM4A7MD48 611 aaKnown RBP13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 C22orf46C9J442 243 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 CLDN34H7C241 214 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 S100A2P29034 98 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 HSPE1P61604 102 aaKnown RBP13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 DIAPH2-AS1Q14236 149 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 HLA-DRB5Q30154 266 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 TMEM177Q53S58 311 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 CENPVQ7Z7K6 275 aaPredicted RBP13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 BEND2Q8NDZ0 799 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 Q8WTZ3 238 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 ENY2Q9NPA8 101 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 FKBP11Q9NYL4 201 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 WASHC3Q9Y3C0 194 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 LRBAP50851 2863 aa13.16□□□□□ -0.3
SNRNP35-204ENST00000527158 SEC14L6B5MCN3 397 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 UPK2O00526 184 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 IFNA10P01566 189 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 IGLV1-47P01700 117 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 MBP02144 154 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 FAM90A2PQ658T7 463 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 BET1LQ9NYM9 111 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 OR51B2Q9Y5P1 312 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 PMS2P5A8MQ11 134 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 CD81P60033 236 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 RAB11AP62491 216 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 DNLZQ5SXM8 178 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 TMEM147Q9BVK8 224 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 ZNF257Q9Y2Q1 563 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 AMMECR1Q9Y4X0 333 aaPredicted RBP13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 USP24Q9UPU5 2620 aa13.15□□□□□ -0.3
SNRNP35-204ENST00000527158 HRNRQ86YZ3 2850 aaPredicted RBP13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 ZNF727A8MUV8 499 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 BUB1B-PAK6H3BSN5 160 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 OVOL3O00110 214 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 KBTBD11O94819 623 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 OPN1MWP04001 364 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 OPN1MW2P0DN77 364 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 OPN1MW3P0DN78 364 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 COX7A1P24310 79 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 RPS16P62249 146 aaKnown RBP13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 RCC1LQ96I51 464 aaKnown RBP13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 UBE2L5PA0A1B0GUS4 154 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 C15orf62A8K5M9 175 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 M0R1W7 72 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 DLX1P56177 255 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 ARF6P62330 175 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 LURAP1LQ8IV03 231 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 DOCK11Q5JSL3 2073 aa13.14□□□□□ -0.31
SNRNP35-204ENST00000527158 PNKDQ8N490 385 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 SDF2L1Q9HCN8 221 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 DOK5Q9P104 306 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 TRBV24-1A0A075B6N3 115 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 MAP1LC3B2A6NCE7 125 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 CXCL1P09341 107 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 PRB3Q04118 309 aaPredicted RBP13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 OR4A5Q8NH83 315 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 FAM210BQ96KR6 192 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 SPOCK3Q9BQ16 436 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 HINT2Q9BX68 163 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 MAP1LC3BQ9GZQ8 125 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 SLC39A9Q9NUM3 307 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 INSIG2Q9Y5U4 225 aa13.13□□□□□ -0.31
SNRNP35-204ENST00000527158 CYB5BO43169 146 aa13.12□□□□□ -0.31
SNRNP35-204ENST00000527158 ENSAO43768 121 aaKnown RBP13.12□□□□□ -0.31
SNRNP35-204ENST00000527158 SOX15O60248 233 aa13.12□□□□□ -0.31
SNRNP35-204ENST00000527158 FBP1P09467 338 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms