RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 TM4SF20Q53R12 229 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 PYDC2Q56P42 97 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 PUSL1Q8N0Z8 303 aaKnown RBP10.61□□□□□ -0.71
CPSF1-201ENST00000526271 GDPD1Q8N9F7 314 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 OR5AP2Q8NGF4 316 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 OSR1Q8TAX0 266 aaPredicted RBP10.61□□□□□ -0.71
CPSF1-201ENST00000526271 IFT46Q9NQC8 304 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 TECRQ9NZ01 308 aaKnown RBP10.61□□□□□ -0.71
CPSF1-201ENST00000526271 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
CPSF1-201ENST00000526271 DYNC1H1Q14204 4646 aaKnown RBP10.61□□□□□ -0.71
CPSF1-201ENST00000526271 MFSD2BA6NFX1 497 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 FCGR3BO75015 233 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 GGCTO75223 188 aaKnown RBP10.6□□□□□ -0.71
CPSF1-201ENST00000526271 SCAF4O95104 1147 aaKnown RBP10.6□□□□□ -0.71
CPSF1-201ENST00000526271 CRYGCP07315 174 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 RRASP10301 218 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
CPSF1-201ENST00000526271 CLEC19AQ6UXS0 136 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 TMEM229BQ8NBD8 167 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 GGTLC1Q9BX51 225 aa10.6□□□□□ -0.71
CPSF1-201ENST00000526271 NPIPB5A8MRT5 1133 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 MPPED1O15442 326 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 DEDDO75618 318 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 CD74P04233 296 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 FCER2P06734 321 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 ZNF735P0CB33 412 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 C8orf88P0DMB2 117 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 PPP5CP53041 499 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 BAK1Q16611 211 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 BTNL8Q6UX41 500 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 WFDC3Q8IUB2 231 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 MMD2Q8IY49 270 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 TRIM63Q969Q1 353 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 ADTRPQ96IZ2 230 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 SPIN2AQ99865 258 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 SPIN2BQ9BPZ2 258 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 TAS2R8Q9NYW2 309 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 ZNF257Q9Y2Q1 563 aa10.59□□□□□ -0.71
CPSF1-201ENST00000526271 RBM7Q9Y580 266 aaKnown RBP10.59□□□□□ -0.71
CPSF1-201ENST00000526271 IGLV11-55A0A075B6I3 123 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 ANKRD20A5PA0PJZ0 165 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 TUSC2O75896 110 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 PMP2P02689 132 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 CTRB1P17538 263 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 NFYAP23511 347 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-201ENST00000526271 HLA-DMAP28067 261 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 TAS2R46P59540 309 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 TAS2R19P59542 299 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 ARPC4P59998 168 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF57Q68EA5 555 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-201ENST00000526271 CTRB2Q6GPI1 263 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 DHRS11Q6UWP2 260 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 LYG2Q86SG7 212 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 TMEM167AQ8TBQ9 72 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 FYTTD1Q96QD9 318 aaKnown RBP10.58□□□□□ -0.72
CPSF1-201ENST00000526271 GINS4Q9BRT9 223 aa10.58□□□□□ -0.72
CPSF1-201ENST00000526271 PKHD1P08F94 4074 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 LOC102724200A0A096LPH7 203 aaPredicted RBP10.57□□□□□ -0.72
CPSF1-201ENST00000526271 KBTBD11O94819 623 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 CD3DP04234 171 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 REG1AP05451 166 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 TBPP20226 339 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 HRH1P35367 487 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 ARL3P36405 182 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 RFX2P48378 723 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 TNFRSF9Q07011 255 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF846Q147U1 533 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF645Q8N7E2 425 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 GIMAP1Q8WWP7 306 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 WDR12Q9GZL7 423 aaKnown RBP10.57□□□□□ -0.72
CPSF1-201ENST00000526271 SLC2A9Q9NRM0 540 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 DNAH11Q96DT5 4516 aa10.57□□□□□ -0.72
CPSF1-201ENST00000526271 TRAV3A0A0B4J244 114 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 IGHV3-35A0A0C4DH35 117 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 CXorf65A6NEN9 183 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 PSMB6P28072 239 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 RPL27AP46776 148 aaKnown RBP10.56□□□□□ -0.72
CPSF1-201ENST00000526271 KLF9Q13886 244 aaPredicted RBP10.56□□□□□ -0.72
CPSF1-201ENST00000526271 DEFB135Q30KP9 77 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 ODF3L2Q3SX64 289 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 STEAP1BQ6NZ63 245 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 KCTD9Q7L273 389 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 OR52B4Q8NGK2 314 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 OR5H2Q8NGV7 314 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 DEDD2Q8WXF8 326 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 CCDC32Q9BV29 185 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 UBQLN2Q9UHD9 624 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 OR2W1Q9Y3N9 320 aa10.56□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF320A2RRD8 509 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 AKAIN1P0CW23 69 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 FCGR2CP31995 323 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 PRR20EP86478 221 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 PRR20CP86479 221 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 PRR20DP86480 221 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 PRR20BP86481 221 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 PRR20AP86496 221 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms