RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 ABHD1Q96SE0 405 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 SLIRPQ9GZT3 109 aaKnown RBP14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 DMRT1Q9Y5R6 373 aa14.05□□□□□ -0.16
TSPAN4-216ENST00000526055 DNAH9Q9NYC9 4486 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 TEX50A0A1B0GTY4 177 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 M0QYG6 137 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 LGALS9O00182 355 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 CD3DP04234 171 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 RPA2P15927 270 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 G6PCP35575 357 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 TAS2R19P59542 299 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 LCN12Q6JVE5 192 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 GPHB5Q86YW7 130 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 GDPD1Q8N9F7 314 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 TMEM229BQ8NBD8 167 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 MCFD2Q8NI22 146 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 C6orf62Q9GZU0 229 aaPredicted RBP14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 MIXL1Q9H2W2 232 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 NDUFA4L2Q9NRX3 87 aa14.04□□□□□ -0.16
TSPAN4-216ENST00000526055 CTDSP2O14595 271 aa14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 CD74P04233 296 aa14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 REG1AP05451 166 aa14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 MECP2P51608 486 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 C19orf35Q6ZS72 473 aa14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 LSM10Q969L4 123 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 CCDC140Q96MF4 163 aa14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 NXF2Q9GZY0 626 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 OR51B2Q9Y5P1 312 aa14.03□□□□□ -0.16
TSPAN4-216ENST00000526055 A8MZ25 164 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 CTDSPLO15194 276 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 SERPINE2P07093 398 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 PGAM2P15259 253 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 ARL3P36405 182 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 CLEC19AQ6UXS0 136 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 HAPLN4Q86UW8 402 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 LAX1Q8IWV1 398 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 OR1L6Q8NGR2 347 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 VN1R17PQ8TDU5 208 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 SEC22AQ96IW7 307 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 TMEM56Q96MV1 263 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 WWC2-AS2Q96NR7 200 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 ATP6V0BQ99437 205 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 TMEM14BQ9NUH8 114 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 U3KQK5 164 aa14.02□□□□□ -0.17
TSPAN4-216ENST00000526055 C15orf61A6NNL5 157 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 PPP5D1E7EU14 171 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 OR13C7P0DN81 318 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 WT1-ASQ06250 92 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 FAM106AQ4KMX7 169 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 RNASE12Q5GAN4 147 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 SGPP2Q8IWX5 399 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 OR10W1Q8NGF6 305 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 TERB2Q8NHR7 220 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 ZFAND1Q8TCF1 268 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 SMIM4Q8WVI0 70 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 DIRAS2Q96HU8 199 aa14.01□□□□□ -0.17
TSPAN4-216ENST00000526055 NBEAL2Q6ZNJ1 2754 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 TENM3Q9P273 2699 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 B3GALNT1O75752 331 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 ATG12O94817 140 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 OR2C1O95371 312 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 RAB3DO95716 219 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 S100A5P33763 92 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 MEF2DQ14814 521 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 STEAP1BQ6NZ63 245 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 H2BFWTQ7Z2G1 175 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 GTSCR1Q86UQ5 136 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 Q8N1Y9 231 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 ZNF502Q8TBZ5 544 aa14□□□□□ -0.17
TSPAN4-216ENST00000526055 TECRQ9NZ01 308 aaKnown RBP14□□□□□ -0.17
TSPAN4-216ENST00000526055 F11RQ9Y624 299 aaKnown RBP14□□□□□ -0.17
TSPAN4-216ENST00000526055 MFSD2BA6NFX1 497 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 C2orf70A6NJV1 201 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 A8MWP6 167 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 IGHV3-23P01764 117 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 CLEC3BP05452 202 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 FRMD6-AS1P0C7T7 363 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 PIGPP57054 158 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 CCDC71LQ8N9Z2 235 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 OR4A16Q8NH70 328 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 DYNLRB2Q8TF09 96 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 THAP7Q9BT49 309 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 NSG2Q9Y328 171 aa13.99□□□□□ -0.17
TSPAN4-216ENST00000526055 IGKV1-39P01597 117 aa13.98□□□□□ -0.17
TSPAN4-216ENST00000526055 HLA-AP01891 365 aaKnown RBP13.98□□□□□ -0.17
TSPAN4-216ENST00000526055 IGKV1D-39P04432 117 aa13.98□□□□□ -0.17
TSPAN4-216ENST00000526055 ASCL2Q99929 193 aa13.98□□□□□ -0.17
TSPAN4-216ENST00000526055 HINT2Q9BX68 163 aa13.98□□□□□ -0.17
TSPAN4-216ENST00000526055 COPZ2Q9P299 210 aa13.98□□□□□ -0.17
TSPAN4-216ENST00000526055 CTSDP07339 412 aaPredicted RBP13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 IGHV4-30-4P0DP06 118 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 FOLR2P14207 255 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 IL18Q14116 193 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 SURF2Q15527 256 aaPredicted RBP13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 DEFB114Q30KQ6 69 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 SCGB2B2Q4G0G5 96 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 SLC25A24Q6NUK1 477 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 ADAMTSL5Q6ZMM2 481 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 SBSPONQ8IVN8 264 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 OR4D10Q8NGI6 311 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms