RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 DEFB108AA8MXU0 73 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 K7EQM0 130 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 M0QZ24 198 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 P2RY10O00398 339 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 DNPH1O43598 174 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 B4GALT2O60909 372 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 UPK3AO75631 287 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 NUDT14O95848 222 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 TSPAN13O95857 204 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 GPX1P07203 203 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 LINC00869P0C866 280 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CT45A6P0DMU7 189 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CT45A5P0DMU8 189 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CT45A7P0DMV0 189 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 PSG1P11464 419 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 SLC25A6P12236 298 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 IGFBP3P17936 291 aaPredicted RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 MALP21145 153 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CRYGSP22914 178 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 GCH1P30793 250 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 NCBP2P52298 156 aaKnown RBP eCLIP4.19□□□□□ -1.74
CD44-218ENST00000525469 CRYBA4P53673 196 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 UCP3P55916 312 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 RPL15P61313 204 aaKnown RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 EWSR1Q01844 656 aaKnown RBP eCLIP4.19□□□□□ -1.74
CD44-218ENST00000525469 HSD52Q0P140 79 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 C17orf67Q0P5P2 114 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 MEP1BQ16820 701 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 LTC4SQ16873 150 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CEACAM21Q3KPI0 293 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 ZNF658BQ4V348 819 aaPredicted RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 ABCA11PQ4W5N1 156 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CT45A1Q5HYN5 189 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 FFAR4Q5NUL3 377 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 GLYATL3Q5SZD4 288 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 FNDC7Q5VTL7 733 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 WDR25Q64LD2 544 aaPredicted RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 SLC18B1Q6NT16 456 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 SLC25A34Q6PIV7 304 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 PLXDC2Q6UX71 529 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 TMEM108Q6UXF1 575 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 IL17RELQ6ZVW7 336 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 NEGR1Q7Z3B1 354 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 TUSC5Q8IXB3 177 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 ADAD2Q8NCV1 583 aaKnown RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 OR5D14Q8NGL3 314 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 OR10G8Q8NGN5 311 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 OR6K6Q8NGW6 343 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CT45A3Q8NHU0 189 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 MRPL30Q8TCC3 161 aaKnown RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 TMEM255BQ8WV15 326 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 OR5P3Q8WZ94 311 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 RAB1CQ92928 201 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 KCNS1Q96KK3 526 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 TNFRSF13CQ96RJ3 184 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 RARRES2Q99969 163 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 SFXN3Q9BWM7 321 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 LINC00470Q9BZP3 86 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 CALHM2Q9HA72 323 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 HEYLQ9NQ87 328 aaPredicted RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 GNG13Q9P2W3 67 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 SPRR3Q9UBC9 169 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 BOKQ9UMX3 212 aaPredicted RBP4.19□□□□□ -1.74
CD44-218ENST00000525469 WNK1Q9H4A3 2382 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 A0A1W2PPV4 95 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 A0A1W2PR80 420 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 GAGE12HA6NDE8 117 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 LIPT2A6NK58 231 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 F8W1H4 67 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 H3BRM9 83 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 CDC42EP2O14613 210 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 TMPRSS11DO60235 418 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 ZFAND5O76080 213 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 IGHG4P01861 327 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 HLA-DQA1P01909 254 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 HMGN2P05204 90 aaKnown RBP4.18□□□□□ -1.74
CD44-218ENST00000525469 OR5AL1P0C617 328 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 PRSS56P0CW18 603 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 PNMTP11086 282 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 HIST1H1DP16402 221 aaKnown RBP4.18□□□□□ -1.74
CD44-218ENST00000525469 AZU1P20160 251 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 CD22P20273 847 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 OMGP23515 440 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 IL12BP29460 328 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 NKX2-1P43699 371 aaPredicted RBP4.18□□□□□ -1.74
CD44-218ENST00000525469 SOX2P48431 317 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 HINT1P49773 126 aaPredicted RBP4.18□□□□□ -1.74
CD44-218ENST00000525469 KRTDAPP60985 99 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 RPL23P62829 140 aaKnown RBP4.18□□□□□ -1.74
CD44-218ENST00000525469 SUPT4H1P63272 117 aaKnown RBP4.18□□□□□ -1.74
CD44-218ENST00000525469 GAGE5Q13069 117 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 GAGE6Q13070 117 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 OR1Q1Q15612 314 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 CD226Q15762 336 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 ANKRD55Q3KP44 614 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 TMEM97Q5BJF2 176 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 PHYHD1Q5SRE7 291 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 FAM120AOSQ5T036 256 aa4.18□□□□□ -1.74
CD44-218ENST00000525469 CARD17Q5XLA6 110 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms