RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 NAV1Q8NEY1 1877 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 NUP214P35658 2090 aaPredicted RBP2.94□□□□□ -1.94
USP47-206ENST00000525367 NUP160Q12769 1436 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 KIAA1671Q9BY89 1806 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 IGKV1D-37A0A075B6S9 117 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 TRAV4A0A0B4J268 109 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 CLDN25C9JDP6 229 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 BANF1O75531 89 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 OR2J2O76002 312 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 DHFRP00374 187 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 AZU1P20160 251 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 CASP1P29466 404 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 ALDH3A1P30838 453 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 ATP5G3P48201 142 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 RBM11P57052 281 aaKnown RBP2.93□□□□□ -1.94
USP47-206ENST00000525367 TPI1P60174 286 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 DHRS2Q13268 280 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 TMEM128Q5BJH2 165 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 SAMD13Q5VXD3 122 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 TOMM20LQ6UXN7 152 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 EIF4E3Q8N5X7 224 aaKnown RBP2.93□□□□□ -1.94
USP47-206ENST00000525367 ZNF709Q8N972 641 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 MAFIPQ8WZ33 124 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 CCDC32Q9BV29 185 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 ASF1BQ9NVP2 202 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 IL36BQ9NZH7 164 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 ZNF443Q9Y2A4 671 aaPredicted RBP2.93□□□□□ -1.94
USP47-206ENST00000525367 SSH2Q76I76 1423 aa2.93□□□□□ -1.94
USP47-206ENST00000525367 ATRXP46100 2492 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 ABCC12Q96J65 1359 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 RIIAD1A6NNX1 92 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 TXNDC9O14530 226 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 CDS2O95674 445 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 NPYP01303 97 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 TFPTP0C1Z6 253 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 RPS4Y1P22090 263 aaKnown RBP2.92□□□□□ -1.94
USP47-206ENST00000525367 CD200P41217 278 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 HIST1H4AP62805 103 aaKnown RBP2.92□□□□□ -1.94
USP47-206ENST00000525367 EIF4EBP2Q13542 120 aaPredicted RBP2.92□□□□□ -1.94
USP47-206ENST00000525367 KPRPQ5T749 579 aaPredicted RBP2.92□□□□□ -1.94
USP47-206ENST00000525367 AADACL3Q5VUY0 350 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 CNEP1R1Q8N9A8 125 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 OR10J5Q8NHC4 309 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 MUC7Q8TAX7 377 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 MBD3L1Q8WWY6 194 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 H1FXQ92522 213 aaKnown RBP2.92□□□□□ -1.94
USP47-206ENST00000525367 DOCK9Q9BZ29 2069 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 SCN1AP35498 2009 aa2.92□□□□□ -1.94
USP47-206ENST00000525367 HECW2Q9P2P5 1572 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 LOC102725191A0A1B0GVB3 256 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 A0A1W2PRE2 83 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 PRORSD1PA6NEY8 169 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 PIAS1O75925 651 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 C1QAP02745 245 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 S100A4P26447 101 aaKnown RBP2.91□□□□□ -1.94
USP47-206ENST00000525367 PSMD8P48556 350 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 PIGPP57054 158 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 RPL18Q07020 188 aaKnown RBP2.91□□□□□ -1.94
USP47-206ENST00000525367 NOXRED1Q6NXP6 359 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 CLVS1Q8IUQ0 354 aaPredicted RBP2.91□□□□□ -1.94
USP47-206ENST00000525367 ZNF675Q8TD23 568 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 PLEKHB2Q96CS7 222 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 CYYR1Q96J86 154 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 DNAJC30Q96LL9 226 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 MIEN1Q9BRT3 115 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 EFCAB11Q9BUY7 163 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 RSPO3Q9BXY4 272 aaPredicted RBP2.91□□□□□ -1.94
USP47-206ENST00000525367 MED11Q9P086 117 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 LAMTOR3Q9UHA4 124 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 ITGB4P16144 1822 aa2.91□□□□□ -1.94
USP47-206ENST00000525367 TRAV38-1A0A0B4J264 116 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 DUXBA0A1W2PPF3 345 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 TMEM150BA6NC51 233 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 C19orf71A6NCJ1 209 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 GGT3PA6NGU5 568 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 TP53I11O14683 189 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 LEPROTO15243 131 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 GTF2A1P52655 376 aaPredicted RBP2.9□□□□□ -1.95
USP47-206ENST00000525367 FOXA1P55317 472 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 ZNF117Q03924 483 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 HTR4Q13639 388 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 SURF2Q15527 256 aaPredicted RBP2.9□□□□□ -1.95
USP47-206ENST00000525367 OR10P1Q8NGE3 313 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 C11orf40Q8WZ69 217 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 LZICQ8WZA0 190 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 DERL1Q9BUN8 251 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 DUSP21Q9H596 190 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 ZNF835Q9Y2P0 537 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 FMN1Q68DA7 1419 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 YEATS2Q9ULM3 1422 aa2.9□□□□□ -1.95
USP47-206ENST00000525367 KIF24Q5T7B8 1368 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 IRGMA1A4Y4 181 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 ARL5CA6NH57 179 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 FABP5P3A8MUU1 101 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 GGTLC3B5MD39 225 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 RPL36A-HNRNPH2H7BZ11 118 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 IGKV1-5P01602 117 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 OR10J4P0C629 311 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 EMP1P54849 157 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 MEF2BQ02080 365 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms