RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 V9GYY5 206 aaPredicted RBP0.96□□□□□ -2.26
CD44-215ENST00000525241 HYDINQ4G0P3 5121 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 HECW1Q76N89 1606 aa0.96□□□□□ -2.26
CD44-215ENST00000525241 TTC28Q96AY4 2481 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 HEATR5BQ9P2D3 2071 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 BIRC6Q9NR09 4857 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 KMT2CQ8NEZ4 4911 aaKnown RBP0.95□□□□□ -2.26
CD44-215ENST00000525241 TRAV7A0A075B6U4 112 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 A0A0J9YW62 118 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 LST1O00453 97 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 ACOX3O15254 700 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 PLA2G10O15496 165 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 SSNA1O43805 119 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 LGALS1P09382 135 aaKnown RBP0.95□□□□□ -2.26
CD44-215ENST00000525241 CCL5P13501 91 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 RPS12P25398 132 aaKnown RBP0.95□□□□□ -2.26
CD44-215ENST00000525241 PSMB8P28062 276 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 EMP1P54849 157 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 AQP4P55087 323 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 EMX1Q04741 257 aaPredicted RBP0.95□□□□□ -2.26
CD44-215ENST00000525241 OR2F1Q13607 317 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 RGS21Q2M5E4 152 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 C1orf195Q5TG92 126 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 UMODL1-AS1Q8N2C9 162 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 ZNF565Q8N9K5 539 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 MNS1Q8NEH6 495 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 RAB2BQ8WUD1 216 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 C8orf76Q96K31 380 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 CST9LQ9H4G1 147 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 TIMM9Q9Y5J7 89 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 FLNCQ14315 2725 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 CFAP46Q8IYW2 2715 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 RP1P56715 2156 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 BAZ2BQ9UIF8 2168 aaKnown RBP0.95□□□□□ -2.26
CD44-215ENST00000525241 PCDH15Q96QU1 1955 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 PDZD2O15018 2839 aa0.95□□□□□ -2.26
CD44-215ENST00000525241 EPPK1P58107 5090 aaKnown RBP0.95□□□□□ -2.26
CD44-215ENST00000525241 KIF13BQ9NQT8 1826 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 FLNAP21333 2647 aaKnown RBP0.94□□□□□ -2.26
CD44-215ENST00000525241 ABCA13Q86UQ4 5058 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 SMARCA4P51532 1647 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 DISC1C4P0D8 188 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 H7C2G1 150 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 MRPS14O60783 128 aaKnown RBP0.94□□□□□ -2.26
CD44-215ENST00000525241 CRPP02741 224 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 HIST1H1EP10412 219 aaKnown RBP0.94□□□□□ -2.26
CD44-215ENST00000525241 MYL12AP19105 171 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 MAP2K4P45985 399 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 RPL28P46779 137 aaKnown RBP0.94□□□□□ -2.26
CD44-215ENST00000525241 AP1S1P61966 158 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 MOGQ16653 247 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 TNFAIP8L3Q5GJ75 292 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 CLVS2Q5SYC1 327 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 CCDC122Q5T0U0 273 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 OGFRL1Q5TC84 451 aaPredicted RBP0.94□□□□□ -2.26
CD44-215ENST00000525241 FAM78BQ5VT40 261 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 RASSF6Q6ZTQ3 369 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 C7orf65Q6ZTY9 151 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 SLC36A1Q7Z2H8 476 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 COMMD7Q86VX2 200 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 TESCQ96BS2 214 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 GNPNAT1Q96EK6 184 aaPredicted RBP0.94□□□□□ -2.26
CD44-215ENST00000525241 TMA16Q96EY4 203 aaKnown RBP0.94□□□□□ -2.26
CD44-215ENST00000525241 GUCA1BQ9UMX6 200 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 DCCP43146 1447 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 MICAL3Q7RTP6 2002 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 COL4A5P29400 1685 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 MED12LQ86YW9 2145 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 POLQO75417 2590 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
CD44-215ENST00000525241 PKD1L1Q8TDX9 2849 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 ZFYVE9O95405 1425 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 NUP160Q12769 1436 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 A0A0D9SEW6 157 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 OR4C45A6NMZ5 311 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 INMT-MINDY4F8WBC2 141 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 H3BT86 120 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 COX7A2LO14548 114 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 APOEP02649 317 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 ALDH3A1P30838 453 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 MARCKSL1P49006 195 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 AP2S1P53680 142 aaPredicted RBP0.93□□□□□ -2.26
CD44-215ENST00000525241 RAB14P61106 215 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 LSM6P62312 80 aaKnown RBP0.93□□□□□ -2.26
CD44-215ENST00000525241 IFITM2Q01629 132 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 RSU1Q15404 277 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 GUK1Q16774 197 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 Q1T7F1 81 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 ACSM3Q53FZ2 586 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 DCXRQ7Z4W1 244 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 OR2T27Q8NH04 317 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 MBD3L1Q8WWY6 194 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 OR51I2Q9H344 312 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 FGFR1OP2Q9NVK5 253 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 ATRQ13535 2644 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 DENND4CQ5VZ89 1909 aa0.93□□□□□ -2.26
CD44-215ENST00000525241 BOD1L1Q8NFC6 3051 aa0.92□□□□□ -2.26
CD44-215ENST00000525241 EVC2Q86UK5 1308 aa0.92□□□□□ -2.26
CD44-215ENST00000525241 CREBBPQ92793 2442 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms