RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CMTM1Q8IZ96 169 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 OR10W1Q8NGF6 305 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 OR6F1Q8NGZ6 308 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 FCAMRQ8WWV6 532 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 DGCR14Q96DF8 476 aaKnown RBP7.12□□□□□ -1.27
SF3B2-204ENST00000525207 CMTM3Q96MX0 182 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 NEURL2Q9BR09 285 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 WFDC10AQ9H1F0 79 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 TUBA4BQ9H853 241 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 SCPEP1Q9HB40 452 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 SLC2A8Q9NY64 477 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 TECRQ9NZ01 308 aaKnown RBP7.12□□□□□ -1.27
SF3B2-204ENST00000525207 COMMD3Q9UBI1 195 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 CEPT1Q9Y6K0 416 aa7.12□□□□□ -1.27
SF3B2-204ENST00000525207 C15orf61A6NNL5 157 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 ZNF785A8K8V0 405 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 TPPPO94811 219 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 GABARAPO95166 117 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 SMIM18P0DKX4 95 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 CBLN1P23435 193 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 RCVRNP35243 200 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 G6PCP35575 357 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 WT1-ASQ06250 92 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 FAM106AQ4KMX7 169 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 ZNF585BQ52M93 769 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 BTNL8Q6UX41 500 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 UNQ9165/PRO28630Q6UXU0 137 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 LINC00322Q6ZN03 302 aaPredicted RBP7.11□□□□□ -1.27
SF3B2-204ENST00000525207 SNX29P2Q8IUI4 249 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 LYSMD2Q8IV50 215 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 TMEM61Q8N0U2 210 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 CADM3Q8N126 398 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 OR1L8Q8NGR8 309 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 TMEM190Q8WZ59 177 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 LSM10Q969L4 123 aaKnown RBP7.11□□□□□ -1.27
SF3B2-204ENST00000525207 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
SF3B2-204ENST00000525207 NDUFA4L2Q9NRX3 87 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 THYN1Q9P016 225 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 MLXQ9UH92 298 aa7.11□□□□□ -1.27
SF3B2-204ENST00000525207 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 CYB5BO43169 146 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 TGOLN2O43493 480 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 HPGDSO60760 199 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 KRASP01116 189 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 SERPINE2P07093 398 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 TRAPPC2P0DI81 140 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 TRAPPC2BP0DI82 140 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 OR13C7P0DN81 318 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 LYL1P12980 280 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 ELK1P19419 428 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 PTBP1P26599 531 aaKnown RBP eCLIP7.1□□□□□ -1.27
SF3B2-204ENST00000525207 LPAR6P43657 344 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 GUCA2BQ16661 112 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 PHLDA2Q53GA4 152 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 ZNF57Q68EA5 555 aaPredicted RBP7.1□□□□□ -1.27
SF3B2-204ENST00000525207 OR5B3Q8NH48 314 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 VN1R17PQ8TDU5 208 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 MARC2Q969Z3 335 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 SRD5A3Q9H8P0 318 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 RETNQ9HD89 108 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 PALMDQ9NP74 551 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 FAM212BQ9NTI7 297 aaPredicted RBP7.1□□□□□ -1.27
SF3B2-204ENST00000525207 NSG2Q9Y328 171 aa7.1□□□□□ -1.27
SF3B2-204ENST00000525207 F11RQ9Y624 299 aaKnown RBP7.1□□□□□ -1.27
SF3B2-204ENST00000525207 TEX50A0A1B0GTY4 177 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 SMIM31A0A1B0GVY4 71 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 ZNF320A2RRD8 509 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
SF3B2-204ENST00000525207 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
SF3B2-204ENST00000525207 DBX1A6NMT0 343 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 OR11H12B2RN74 326 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 CLEC3BP05452 202 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
SF3B2-204ENST00000525207 S100GP29377 79 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 RORCP51449 518 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 MFAP2P55001 183 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
SF3B2-204ENST00000525207 UCP3P55916 312 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 TSPAN5P62079 268 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 CTF1Q16619 201 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 LPCAT3Q6P1A2 487 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 PLET1Q6UQ28 207 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 SLC16A13Q7RTY0 426 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 TBC1D26Q86UD7 250 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 SLC38A6Q8IZM9 456 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 DEFB125Q8N687 156 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 UXS1Q8NBZ7 420 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 AP3S1Q92572 193 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 BSCL2Q96G97 398 aaPredicted RBP7.09□□□□□ -1.27
SF3B2-204ENST00000525207 ATP6V0BQ99437 205 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 TSC22D3Q99576 134 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 HINT2Q9BX68 163 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 ZNF436Q9C0F3 470 aaPredicted RBP7.09□□□□□ -1.27
SF3B2-204ENST00000525207 NAA50Q9GZZ1 169 aaKnown RBP7.09□□□□□ -1.27
SF3B2-204ENST00000525207 HIPK2Q9H2X6 1198 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 TMEM14BQ9NUH8 114 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 PRNDQ9UKY0 176 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 OR51B2Q9Y5P1 312 aa7.09□□□□□ -1.27
SF3B2-204ENST00000525207 STARD9Q9P2P6 4700 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms