RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 BSCL2Q96G97 398 aaPredicted RBP8.42□□□□□ -1.06
SDCBP-211ENST00000523441 NDUFAF3Q9BU61 184 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 RNF126Q9BV68 326 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 COMMD5Q9GZQ3 224 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 ETV7Q9Y603 341 aa8.42□□□□□ -1.06
SDCBP-211ENST00000523441 C15orf61A6NNL5 157 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 NUPL2O15504 423 aaKnown RBP8.41□□□□□ -1.06
SDCBP-211ENST00000523441 IFNA21P01568 189 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 IFNA17P01571 189 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 IGLV2-14P01704 120 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 CD37P11049 281 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 GADD45AP24522 165 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 CMC4P56277 68 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-211ENST00000523441 BRWD1-AS2P59051 145 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 TIMM50Q3ZCQ8 353 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 LIPKQ5VXJ0 399 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 ZFP1Q6P2D0 407 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 FAM24BQ8N5W8 94 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 OR10R2Q8NGX6 335 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 VN1R17PQ8TDU5 208 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 HRH4Q9H3N8 390 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 C21orf62Q9NYP8 219 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 RABAC1Q9UI14 185 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
SDCBP-211ENST00000523441 CYB5BO43169 146 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 ST8SIA3O43173 380 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 IGHV3-48P01763 117 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 UCHL1P09936 223 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 HSMCR30P0CW71 290 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 CALRP27797 417 aaKnown RBP8.4□□□□□ -1.06
SDCBP-211ENST00000523441 RPS25P62851 125 aaKnown RBP8.4□□□□□ -1.06
SDCBP-211ENST00000523441 PAFAH1B2P68402 229 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 C12orf74Q32Q52 190 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 LGALS9BQ3B8N2 356 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 SOHLH1Q5JUK2 328 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 SPAG16Q8N0X2 631 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 DMBX1Q8NFW5 382 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 SCARB1Q8WTV0 552 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 SECTM1Q8WVN6 248 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 HSD17B10Q99714 261 aaKnown RBP8.4□□□□□ -1.06
SDCBP-211ENST00000523441 PSORS1C1Q9UIG5 152 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 RAB22AQ9UL26 194 aa8.4□□□□□ -1.06
SDCBP-211ENST00000523441 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 K7EMT4 169 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 SULT1C2O00338 296 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 MFNGO00587 321 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 ATP5HO75947 161 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 HLA-DQB1P01920 261 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 AMBPP02760 352 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 EIF4EP06730 217 aaKnown RBP8.39□□□□□ -1.07
SDCBP-211ENST00000523441 MIFP14174 115 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 HIST1H1DP16402 221 aaKnown RBP8.39□□□□□ -1.07
SDCBP-211ENST00000523441 C4BPBP20851 252 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 SPSB3Q6PJ21 355 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 PQLC1Q8N2U9 271 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 GDPD1Q8N9F7 314 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 ST8SIA2Q92186 375 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 MND1Q9BWT6 205 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 QTRT1Q9BXR0 403 aaKnown RBP8.39□□□□□ -1.07
SDCBP-211ENST00000523441 MS4A6AQ9H2W1 248 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 X6R8D5 127 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 HERC1Q15751 4861 aa8.39□□□□□ -1.07
SDCBP-211ENST00000523441 TRAV14DV4A0A0A6YYC5 116 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 PTGES3LE9PB15 166 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 UPK2O00526 184 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 DFFBO76075 338 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 APOHP02749 345 aaPredicted RBP8.38□□□□□ -1.07
SDCBP-211ENST00000523441 SERPINE2P07093 398 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 GNAO1P09471 354 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 TRAPPC2P0DI81 140 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 TRAPPC2BP0DI82 140 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 PTHLHP12272 177 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 HTN3P15516 51 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 EMP1P54849 157 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 WT1-ASQ06250 92 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 KLK9Q2XQG4 91 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 TMEM91Q6ZNR0 172 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 Q6ZRM9 215 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 UFD1Q92890 307 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 ATG5Q9H1Y0 275 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 S100A14Q9HCY8 104 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 TMEM140Q9NV12 185 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 BET1LQ9NYM9 111 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 KLK9Q9UKQ9 250 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 TBC1D24Q9ULP9 559 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 V9GY05 133 aa8.38□□□□□ -1.07
SDCBP-211ENST00000523441 TEX50A0A1B0GTY4 177 aa8.37□□□□□ -1.07
SDCBP-211ENST00000523441 F8W735 103 aaPredicted RBP8.37□□□□□ -1.07
SDCBP-211ENST00000523441 SLC22A5O76082 557 aa8.37□□□□□ -1.07
SDCBP-211ENST00000523441 DIRAS3O95661 229 aa8.37□□□□□ -1.07
SDCBP-211ENST00000523441 FCER2P06734 321 aa8.37□□□□□ -1.07
SDCBP-211ENST00000523441 CTSGP08311 255 aa8.37□□□□□ -1.07
SDCBP-211ENST00000523441 GIG44P09565 113 aaPredicted RBP8.37□□□□□ -1.07
SDCBP-211ENST00000523441 OR10A3P58181 314 aa8.37□□□□□ -1.07
SDCBP-211ENST00000523441 TNP2Q05952 138 aa8.37□□□□□ -1.07
SDCBP-211ENST00000523441 LAIR2Q6ISS4 152 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms