RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 PRR20DP86480 221 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 PRR20BP86481 221 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 PRR20AP86496 221 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 ARL6IP1Q15041 203 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 TBCEQ15813 527 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 SPAG16Q8N0X2 631 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 OR5B3Q8NH48 314 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 OR4A5Q8NH83 315 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 SECTM1Q8WVN6 248 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 CHRDL1Q9BU40 450 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 MAP6D1Q9H9H5 199 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 ZNF207O43670 478 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 ZNF367Q7RTV3 350 aa11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 GVQW1Q8N7I0 195 aa11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-213ENST00000522504 CTSDP07339 412 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 SMIM18P0DKX4 95 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 FCGR2CP31995 323 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 ADMP35318 185 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 GNG2P59768 71 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 NANOS2P60321 138 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 NEDD8Q15843 81 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 POU2AF1Q16633 256 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 OR13F1Q8NGS4 319 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
TRAPPC9-213ENST00000522504 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 RBFOX2O43251 390 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 OR13C7P0DN81 318 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 TAS2R31P59538 309 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 TMEM217Q8N7C4 229 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 GDPD1Q8N9F7 314 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 FCGR1BQ92637 280 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 GALNT14Q96FL9 552 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 C20orf24Q9BUV8 137 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 QTRT1Q9BXR0 403 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 MRPS26Q9BYN8 205 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 COMMD5Q9GZQ3 224 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 VCX3AQ9NNX9 186 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 TMEM140Q9NV12 185 aa11.22□□□□□ -0.61
TRAPPC9-213ENST00000522504 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 TEX50A0A1B0GTY4 177 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 NOTOA8MTQ0 251 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 PPYP01298 95 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 FCER2P06734 321 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 SERPINE2P07093 398 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 NQO2P16083 231 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 PSMB9P28065 219 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 MSMO1Q15800 293 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 UBE2UQ5VVX9 321 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 LAMTOR1Q6IAA8 161 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 SLC25A24Q6NUK1 477 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 BEST4Q8NFU0 473 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 LGALS14Q8TCE9 139 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 BSCL2Q96G97 398 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 RNF2Q99496 336 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 SRSF8Q9BRL6 282 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 SLC5A7Q9GZV3 580 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 THYN1Q9P016 225 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 DAPK2Q9UIK4 370 aa11.21□□□□□ -0.61
TRAPPC9-213ENST00000522504 OR4C46A6NHA9 309 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 K7EIM0 57 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 NDUFA4O00483 81 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 HPRT1P00492 218 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 OR51H1Q8NH63 302 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 CD300LFQ8TDQ1 290 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 SCARB1Q8WTV0 552 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 AIFM2Q9BRQ8 373 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 CSTL1Q9H114 145 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 C21orf62Q9NYP8 219 aa11.2□□□□□ -0.62
TRAPPC9-213ENST00000522504 PKD1P98161 4303 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 IGHV3-49A0A0A0MS15 119 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 K7EMT4 169 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 DEFB4AO15263 64 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 TRAPPC2P0DI81 140 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 TRAPPC2BP0DI82 140 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 FXYD4P59646 89 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 ARPC4P59998 168 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 HOGA1Q86XE5 327 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 ZBTB34Q8NCN2 500 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 DMBX1Q8NFW5 382 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 OR5H6Q8NGV6 325 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 RARRES2Q99969 163 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 PLEKHA2Q9HB19 425 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 TXNL4BQ9NX01 149 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 RHBDL2Q9NX52 303 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 FBXL17Q9UF56 701 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 SMPXQ9UHP9 88 aa11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-213ENST00000522504 TRAV18A0A075B6X5 111 aa11.18□□□□□ -0.62
TRAPPC9-213ENST00000522504 CTSGP08311 255 aa11.18□□□□□ -0.62
TRAPPC9-213ENST00000522504 TFPI2P48307 235 aa11.18□□□□□ -0.62
TRAPPC9-213ENST00000522504 SPSB3Q6PJ21 355 aa11.18□□□□□ -0.62
TRAPPC9-213ENST00000522504 UBAC2Q8NBM4 344 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms