RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PAX9P55771 341 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 RPL23AP62750 156 aaKnown RBP16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 KRTAP21-3Q3LHN1 58 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 C5orf56Q8N8D9 126 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 INO80EQ8NBZ0 244 aaPredicted RBP16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 SMIM8Q96KF7 97 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 CIB3Q96Q77 187 aaPredicted RBP16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 HIPK2Q9H2X6 1198 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 HEYLQ9NQ87 328 aaPredicted RBP16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 PSENENQ9NZ42 101 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 TNFSF18Q9UNG2 199 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 HMSDA8MTL9 139 aa16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 H3BP45 60 aa16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 P2RY1P47900 373 aa16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 SCGB2A2Q13296 93 aa16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 FXYD3Q14802 87 aa16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 RBMS3Q6XE24 437 aaKnown RBP16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 OR10W1Q8NGF6 305 aa16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 CDC42EP3Q9UKI2 254 aa16.97■□□□□ 0.31
R3HCC1-208ENST00000522012 FAM24AA6NFZ4 105 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 SH2D7A6NKC9 451 aaPredicted RBP16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 CGB1A6NKQ9 187 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 FGF16O43320 207 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 SRD5A1P18405 259 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 VDAC2P45880 294 aaPredicted RBP16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 AP2S1P53680 142 aaPredicted RBP16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 TAS2R30P59541 319 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 CX3CL1P78423 397 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 SSBP2P81877 361 aaPredicted RBP16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 SPANXN5Q5MJ07 72 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 ZNF562Q6V9R5 426 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 MFFQ9GZY8 342 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 ZC4H2Q9NQZ6 224 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 WSB1Q9Y6I7 421 aa16.96■□□□□ 0.31
R3HCC1-208ENST00000522012 A0A1B0GW64 132 aa16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 A0A1W2PN81 502 aa16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 HLA-DRB1P01911 266 aa16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 CHRNA7P36544 502 aa16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 C16orf82Q7Z2V1 217 aa16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 OR2C3Q8N628 320 aa16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 SRSF12Q8WXF0 261 aaKnown RBP16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 VPREB3Q9UKI3 123 aa16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 PAIP2BQ9ULR5 123 aaKnown RBP16.96■□□□□ 0.3
R3HCC1-208ENST00000522012 MSGN1A6NI15 193 aa16.95■□□□□ 0.3
R3HCC1-208ENST00000522012 M0QZK8 103 aa16.95■□□□□ 0.3
R3HCC1-208ENST00000522012 RPL12P30050 165 aaKnown RBP16.95■□□□□ 0.3
R3HCC1-208ENST00000522012 ABHD5Q8WTS1 349 aa16.95■□□□□ 0.3
R3HCC1-208ENST00000522012 LYRM2Q9NU23 88 aaPredicted RBP16.95■□□□□ 0.3
R3HCC1-208ENST00000522012 ZFHX3Q15911 3703 aa16.95■□□□□ 0.3
R3HCC1-208ENST00000522012 IGHV7-81A0A0B4J1V7 117 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 TSC22D2O75157 780 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 LY86O95711 162 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 AMY1AP04745 511 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 APELAP0DMC3 54 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 HKR1P10072 659 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 CXCL2P19875 107 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 TUSC1Q2TAM9 212 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 ACOT7LQ6ZUV0 252 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 ARPC1AQ92747 370 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 HSPB9Q9BQS6 159 aa16.94■□□□□ 0.3
R3HCC1-208ENST00000522012 RNF222A6NCQ9 220 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 INAFM1C9JVW0 142 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 IFNA10P01566 189 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 ERHP84090 104 aaKnown RBP16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 LGALSLQ3ZCW2 172 aaPredicted RBP16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 C9orf152Q5JTZ5 239 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 C9orf62Q8N4C0 152 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 AQP10Q96PS8 301 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 DUX5Q96PT3 197 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 FAM103A1Q9BTL3 118 aaKnown RBP16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 SLC25A31Q9H0C2 315 aa16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 STRAPQ9Y3F4 350 aaKnown RBP16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 SETD2Q9BYW2 2564 aaPredicted RBP16.93■□□□□ 0.3
R3HCC1-208ENST00000522012 ACANP16112 2415 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 IGSF23A1L1A6 192 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 TEX22C9J3V5 150 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 OR13C7P0DN81 318 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 RPP30P78346 268 aaKnown RBP16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 WT1-ASQ06250 92 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 TMEM267Q0VDI3 215 aaPredicted RBP16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 MRPL41Q8IXM3 137 aaKnown RBP16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 TMEM252Q8N6L7 170 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 OR4C12Q96R67 309 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 HSPB11Q9Y547 144 aa16.92■□□□□ 0.3
R3HCC1-208ENST00000522012 SNCAP37840 140 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 NDPQ00604 133 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 OR2F1Q13607 317 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 LAMTOR1Q6IAA8 161 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 PARP11Q9NR21 331 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 U3KQ87 197 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 IGLC7A0M8Q6 106 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 CST7O76096 145 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 REG1AP05451 166 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 METTL15P1P0C7V9 234 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 AREGP15514 252 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 BLCAPP62952 87 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 EWSR1Q01844 656 aaKnown RBP eCLIP16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 SLC24A4Q8NFF2 622 aa16.91■□□□□ 0.3
R3HCC1-208ENST00000522012 INS-IGF2F8WCM5 200 aa16.9■□□□□ 0.3
R3HCC1-208ENST00000522012 HTR2BP41595 481 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms