RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 PHB2Q99623 299 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 QTRT1Q9BXR0 403 aaKnown RBP13.64□□□□□ -0.23
TRAM1-203ENST00000520700 DBX1A6NMT0 343 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 SNRPGP15A8MWD9 76 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 INS-IGF2F8WCM5 200 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 DHFRP00374 187 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 CRYGCP07315 174 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 PSMB8P28062 276 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 IZUMO4Q1ZYL8 232 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 SHISA2Q6UWI4 295 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 ZNF329Q86UD4 541 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 C3orf56Q8N813 242 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 OR4X2Q8NGF9 303 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 FAM110DQ8TAY7 271 aaPredicted RBP13.63□□□□□ -0.23
TRAM1-203ENST00000520700 GPN1Q9HCN4 374 aaPredicted RBP13.63□□□□□ -0.23
TRAM1-203ENST00000520700 STAB1Q9NY15 2570 aa13.63□□□□□ -0.23
TRAM1-203ENST00000520700 NPIPB5A8MRT5 1133 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 SOX15O60248 233 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 PITX3O75364 302 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 SULT1A3P0DMM9 295 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 SULT1A4P0DMN0 295 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 MYOD1P15172 320 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 SPNP16150 400 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 PRCDQ00LT1 54 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 ECSCRQ19T08 205 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 RGS21Q2M5E4 152 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 TCTEX1D4Q5JR98 221 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 OR52B4Q8NGK2 314 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 MYOZ3Q8TDC0 251 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 SEC22CQ9BRL7 303 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 CACNG5Q9UF02 275 aa13.62□□□□□ -0.23
TRAM1-203ENST00000520700 IGLC7A0M8Q6 106 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 ST8SIA3O43173 380 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 FBXO24O75426 580 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 SPCS3P61009 180 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 GGNBP1Q5YKI7 109 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 C10orf99Q6UWK7 81 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 C12orf45Q8N5I9 185 aaPredicted RBP13.61□□□□□ -0.23
TRAM1-203ENST00000520700 FYTTD1Q96QD9 318 aaKnown RBP13.61□□□□□ -0.23
TRAM1-203ENST00000520700 SLA2Q9H6Q3 261 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 ZFP57Q9NU63 452 aa13.61□□□□□ -0.23
TRAM1-203ENST00000520700 A0A1W2PN81 502 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 HMX3A6NHT5 357 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 RBMXL2O75526 392 aaKnown RBP13.6□□□□□ -0.23
TRAM1-203ENST00000520700 IFNA21P01568 189 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 OPN1MWP04001 364 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 OPN1MW2P0DN77 364 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 OPN1MW3P0DN78 364 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 CD28P10747 220 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 CTRB1P17538 263 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 PSMB6P28072 239 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 CHRNA7P36544 502 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 OXA1LQ15070 435 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 CTRB2Q6GPI1 263 aa13.6□□□□□ -0.23
TRAM1-203ENST00000520700 MRPL41Q8IXM3 137 aaKnown RBP13.6□□□□□ -0.23
TRAM1-203ENST00000520700 FAM90A26D6RGX4 464 aa13.59□□□□□ -0.23
TRAM1-203ENST00000520700 HOXB5P09067 269 aa13.59□□□□□ -0.23
TRAM1-203ENST00000520700 RAB9AP51151 201 aa13.59□□□□□ -0.23
TRAM1-203ENST00000520700 KIAA0141Q14154 515 aaPredicted RBP13.59□□□□□ -0.23
TRAM1-203ENST00000520700 CXorf66Q5JRM2 361 aaPredicted RBP13.59□□□□□ -0.23
TRAM1-203ENST00000520700 OR5T1Q8NG75 326 aa13.59□□□□□ -0.23
TRAM1-203ENST00000520700 PDCD10Q9BUL8 212 aa13.59□□□□□ -0.23
TRAM1-203ENST00000520700 TRBV9A0A0B4J1U6 114 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 C7orf66A4D0T2 115 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 ADAP1O75689 374 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 IFNA17P01571 189 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 AREGP15514 252 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 CDX1P47902 265 aaPredicted RBP13.58□□□□□ -0.24
TRAM1-203ENST00000520700 WT1-ASQ06250 92 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 TMEM65Q6PI78 240 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 NDUFA11Q86Y39 141 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 OR2C3Q8N628 320 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 OR10W1Q8NGF6 305 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 HSPB7Q9UBY9 170 aa13.58□□□□□ -0.24
TRAM1-203ENST00000520700 TSSC4Q9Y5U2 329 aaPredicted RBP13.58□□□□□ -0.24
TRAM1-203ENST00000520700 TCRBV4S1A1TA0A5B7 111 aa13.57□□□□□ -0.24
TRAM1-203ENST00000520700 OR13C7P0DN81 318 aa13.57□□□□□ -0.24
TRAM1-203ENST00000520700 SRSF4Q08170 494 aaKnown RBP13.57□□□□□ -0.24
TRAM1-203ENST00000520700 ZNF114Q8NC26 417 aa13.57□□□□□ -0.24
TRAM1-203ENST00000520700 OR1L6Q8NGR2 347 aa13.57□□□□□ -0.24
TRAM1-203ENST00000520700 UBE2E2Q96LR5 201 aa13.57□□□□□ -0.24
TRAM1-203ENST00000520700 CITED2Q99967 270 aaPredicted RBP13.57□□□□□ -0.24
TRAM1-203ENST00000520700 KLK15Q9H2R5 256 aa13.57□□□□□ -0.24
TRAM1-203ENST00000520700 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
TRAM1-203ENST00000520700 TET2Q6N021 2002 aaPredicted RBP13.56□□□□□ -0.24
TRAM1-203ENST00000520700 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
TRAM1-203ENST00000520700 PF4V1P10720 104 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 HIST1H1BP16401 226 aaKnown RBP13.56□□□□□ -0.24
TRAM1-203ENST00000520700 RPL23AP62750 156 aaKnown RBP13.56□□□□□ -0.24
TRAM1-203ENST00000520700 ERHP84090 104 aaKnown RBP13.56□□□□□ -0.24
TRAM1-203ENST00000520700 ID3Q02535 119 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 TNFRSF9Q07011 255 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 TATDN3Q17R31 274 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 ZNF491Q8N8L2 437 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 OR1S1Q8NH92 325 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 USMG5Q96IX5 58 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 FANCD2OSQ96PS1 177 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 HINT2Q9BX68 163 aa13.56□□□□□ -0.24
TRAM1-203ENST00000520700 A0A0G2JLM5 398 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms