RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 WSB1Q9Y6I7 421 aa7.12□□□□□ -1.27
CSMD1-208ENST00000520561 FLNBO75369 2602 aaKnown RBP7.11□□□□□ -1.27
CSMD1-208ENST00000520561 IGHV7-81A0A0B4J1V7 117 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 CYSRT1A8MQ03 144 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 INAFM1C9JVW0 142 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 H0YIZ8 118 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 H3BP45 60 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 FCN1O00602 326 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 ARPC5O15511 151 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 KCNAB3O43448 404 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 SCAF4O95104 1147 aaKnown RBP7.11□□□□□ -1.27
CSMD1-208ENST00000520561 IFNA10P01566 189 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 CX3CL1P78423 397 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 ERHP84090 104 aaKnown RBP7.11□□□□□ -1.27
CSMD1-208ENST00000520561 FXYD3Q14802 87 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 MRGPRG-AS1Q2M3A8 158 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 C9orf152Q5JTZ5 239 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 SPANXN5Q5MJ07 72 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 ZNF546Q86UE3 836 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 STX12Q86Y82 276 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 OR2C3Q8N628 320 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 SMIM8Q96KF7 97 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 RNF126Q9BV68 326 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 SLC25A31Q9H0C2 315 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 GSX1Q9H4S2 264 aaPredicted RBP7.11□□□□□ -1.27
CSMD1-208ENST00000520561 PARP11Q9NR21 331 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 LYRM2Q9NU23 88 aaPredicted RBP7.11□□□□□ -1.27
CSMD1-208ENST00000520561 PAIP2BQ9ULR5 123 aaKnown RBP7.11□□□□□ -1.27
CSMD1-208ENST00000520561 TNFSF18Q9UNG2 199 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 STRAPQ9Y3F4 350 aaKnown RBP7.11□□□□□ -1.27
CSMD1-208ENST00000520561 CSPG4Q6UVK1 2322 aa7.11□□□□□ -1.27
CSMD1-208ENST00000520561 DNAJC9-AS1A6NH13 148 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 SH2D7A6NKC9 451 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-208ENST00000520561 HMSDA8MTL9 139 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 INS-IGF2F8WCM5 200 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 OR8U8P0C7N1 319 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 NPY1RP25929 384 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 HTR2BP41595 481 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 VDAC2P45880 294 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-208ENST00000520561 NKX2-5P52952 324 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-208ENST00000520561 NDPQ00604 133 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 TUSC1Q2TAM9 212 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 TMEM65Q6PI78 240 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 SLC24A4Q8NFF2 622 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 OR11H4Q8NGC9 324 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 JMJD8Q96S16 334 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 HSPB9Q9BQS6 159 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 NPFFR1Q9GZQ6 430 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 MFFQ9GZY8 342 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 C11orf1Q9H5F2 150 aa7.1□□□□□ -1.27
CSMD1-208ENST00000520561 IGLC7A0M8Q6 106 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 FAM24AA6NFZ4 105 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 MSGN1A6NI15 193 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 CGB1A6NKQ9 187 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 ATP6V0E1O15342 81 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 TMEM50AO95807 157 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 FAM157CP0CG43 387 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 OR13C7P0DN81 318 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 HKR1P10072 659 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 C4BPBP20851 252 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 RPL12P30050 165 aaKnown RBP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 SNCAP37840 140 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 AP2S1P53680 142 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 SUB1P53999 127 aaKnown RBP eCLIP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 RAB11AP62491 216 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 SSBP2P81877 361 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 EWSR1Q01844 656 aaKnown RBP eCLIP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 BAXQ07812 192 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 TMEM267Q0VDI3 215 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 OR2F1Q13607 317 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 ZNF345Q14585 488 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 ECSCRQ19T08 205 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 ARSJQ5FYB0 599 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 ACOT7LQ6ZUV0 252 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 SLC35E3Q7Z769 313 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 OR10W1Q8NGF6 305 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 AQP10Q96PS8 301 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 DUX5Q96PT3 197 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 OR4C12Q96R67 309 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 FAM103A1Q9BTL3 118 aaKnown RBP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 PRSS22Q9GZN4 317 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 U3KQ87 197 aa7.09□□□□□ -1.27
CSMD1-208ENST00000520561 ZNF469Q96JG9 3925 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-208ENST00000520561 NAV3Q8IVL0 2385 aa7.09□□□□□ -1.28
CSMD1-208ENST00000520561 AKAP9Q99996 3911 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 A0A0D9SG52 128 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 A0A1B0GW64 132 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 KANTRA0A1W2PQU2 76 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 IGSF23A1L1A6 192 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 RNF222A6NCQ9 220 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 E7EUB6 86 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 CLDN34H7C241 214 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 TRIM77I1YAP6 450 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 CYB5BO43169 146 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 CRLF1O75462 422 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 AMY1AP04745 511 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 METTL15P1P0C7V9 234 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 APELAP0DMC3 54 aa7.08□□□□□ -1.28
CSMD1-208ENST00000520561 AREGP15514 252 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms