RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TRAV25A0A0B4J276 109 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 CYB5BO43169 146 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 FGF2P09038 288 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 TRAPPC2P0DI81 140 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 TRAPPC2BP0DI82 140 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 C8orf88P0DMB2 117 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 GNRHRP30968 328 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 GDPD1Q8N9F7 314 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 OR1L6Q8NGR2 347 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 BORCS5Q969J3 196 aa11.34□□□□□ -0.59
CSMD1-207ENST00000520451 MRPL27Q9P0M9 148 aaKnown RBP11.34□□□□□ -0.59
CSMD1-207ENST00000520451 OR2T8A6NH00 312 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 MARCH11A6NNE9 402 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 TGOLN2O43493 480 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 XRCC3O43542 346 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 RLN1P04808 185 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 OR13C7P0DN81 318 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 ELLP55199 621 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-207ENST00000520451 THOC7Q6I9Y2 204 aaKnown RBP11.33□□□□□ -0.6
CSMD1-207ENST00000520451 OR1L8Q8NGR8 309 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 VN1R17PQ8TDU5 208 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 TMEM190Q8WZ59 177 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 S100A16Q96FQ6 103 aaKnown RBP11.33□□□□□ -0.6
CSMD1-207ENST00000520451 OVOL2Q9BRP0 275 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 ZNF2Q9BSG1 426 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-207ENST00000520451 HINT2Q9BX68 163 aa11.33□□□□□ -0.6
CSMD1-207ENST00000520451 ZNF436Q9C0F3 470 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-207ENST00000520451 ALMS1Q8TCU4 4167 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 TMEM127O75204 238 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 PMP2P02689 132 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 SERPINE2P07093 398 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 RFX2P48378 723 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 WT1-ASQ06250 92 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
CSMD1-207ENST00000520451 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
CSMD1-207ENST00000520451 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 PGLYRP1O75594 196 aaPredicted RBP11.31□□□□□ -0.6
CSMD1-207ENST00000520451 F2RP25116 425 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 TGFBR1P36897 503 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 UBE2NLQ5JXB2 153 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 TMEM69Q5SWH9 247 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 DHRS11Q6UWP2 260 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 CROCCP3Q8IVE0 287 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 OR2C3Q8N628 320 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 OR5H2Q8NGV7 314 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 BSCL2Q96G97 398 aaPredicted RBP11.31□□□□□ -0.6
CSMD1-207ENST00000520451 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
CSMD1-207ENST00000520451 C5orf66Q9H5L9 145 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
CSMD1-207ENST00000520451 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
CSMD1-207ENST00000520451 F11RQ9Y624 299 aaKnown RBP11.31□□□□□ -0.6
CSMD1-207ENST00000520451 SNAPC5O75971 98 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 KRASP01116 189 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 G6PCP35575 357 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 LPAR6P43657 344 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 MFAP2P55001 183 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 TAS2R46P59540 309 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 TAS2R20P59543 309 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 KCTD21Q4G0X4 260 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 SAMD12Q8N8I0 201 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 TSPAN14Q8NG11 270 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 FCAMRQ8WWV6 532 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 LSM10Q969L4 123 aaKnown RBP11.3□□□□□ -0.6
CSMD1-207ENST00000520451 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
CSMD1-207ENST00000520451 FXYD6Q9H0Q3 95 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 C21orf62Q9NYP8 219 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 UBQLN2Q9UHD9 624 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 ANAPC10Q9UM13 185 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 OR51B2Q9Y5P1 312 aa11.3□□□□□ -0.6
CSMD1-207ENST00000520451 TSPAN4O14817 238 aa11.29□□□□□ -0.6
CSMD1-207ENST00000520451 APOC4P55056 127 aa11.29□□□□□ -0.6
CSMD1-207ENST00000520451 LAMTOR1Q6IAA8 161 aa11.29□□□□□ -0.6
CSMD1-207ENST00000520451 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
CSMD1-207ENST00000520451 UBAC2Q8NBM4 344 aa11.29□□□□□ -0.6
CSMD1-207ENST00000520451 CHRDL1Q9BU40 450 aa11.29□□□□□ -0.6
CSMD1-207ENST00000520451 C20orf24Q9BUV8 137 aa11.29□□□□□ -0.6
CSMD1-207ENST00000520451 IGHV3OR16-8A0A075B7F1 116 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 GPR31O00270 319 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 NDUFA4O00483 81 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 NAT1P18440 290 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 RPS19P39019 145 aaKnown RBP11.28□□□□□ -0.6
CSMD1-207ENST00000520451 LSM3P62310 102 aaKnown RBP11.28□□□□□ -0.6
CSMD1-207ENST00000520451 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 Q56UQ5 140 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 OR6F1Q8NGZ6 308 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 SCARB1Q8WTV0 552 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
CSMD1-207ENST00000520451 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
CSMD1-207ENST00000520451 CXorf65A6NEN9 183 aa11.27□□□□□ -0.61
CSMD1-207ENST00000520451 F8W735 103 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-207ENST00000520451 K7EIM0 57 aa11.27□□□□□ -0.61
CSMD1-207ENST00000520451 ZNF207O43670 478 aaKnown RBP11.27□□□□□ -0.61
CSMD1-207ENST00000520451 HLA-DMAP28067 261 aa11.27□□□□□ -0.61
CSMD1-207ENST00000520451 PRSS3P35030 304 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms