RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 NSA2O95478 260 aaKnown RBP0.89□□□□□ -2.27
SKP1-207ENST00000520417 SRP19P09132 144 aaKnown RBP0.89□□□□□ -2.27
SKP1-207ENST00000520417 HIST1H1EP10412 219 aaKnown RBP0.89□□□□□ -2.27
SKP1-207ENST00000520417 FGF6P10767 208 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 CCL1P22362 96 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 G6PCP35575 357 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 CEBPGP53567 150 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 MYL6P60660 151 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 SPCS3P61009 180 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 PMAIP1Q13794 54 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 CDK5R1Q15078 307 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 GRK1Q15835 563 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 ARHGAP11BQ3KRB8 267 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 ACSM3Q53FZ2 586 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 GLT8D1Q68CQ7 371 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 SFXN4Q6P4A7 337 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 FAM173BQ6P4H8 233 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 SSX8Q7RTT4 187 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 ZNF550Q7Z398 422 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 ANKRD7Q92527 254 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 ROPN1LQ96C74 230 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 CCDC42Q96M95 316 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 XPNPEP1Q9NQW7 623 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 C9orf84Q5VXU9 1444 aa0.89□□□□□ -2.27
SKP1-207ENST00000520417 MEIS3P1A6NDR6 274 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 INMT-MINDY4F8WBC2 141 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 SLC22A1O15245 554 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 NOS1APO75052 506 aaPredicted RBP0.88□□□□□ -2.27
SKP1-207ENST00000520417 LYPLA2O95372 231 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 MSMBP08118 114 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 RPS17P08708 135 aaKnown RBP0.88□□□□□ -2.27
SKP1-207ENST00000520417 UBBP0CG47 229 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 SULT1A3P0DMM9 295 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 SULT1A4P0DMN0 295 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 HLA-DMBP28068 263 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 OMPP47874 163 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 EIF2B2P49770 351 aaKnown RBP0.88□□□□□ -2.27
SKP1-207ENST00000520417 SULT1A1P50225 295 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 KRTAP10-4P60372 401 aaPredicted RBP0.88□□□□□ -2.27
SKP1-207ENST00000520417 TNFAIP6P98066 277 aaPredicted RBP0.88□□□□□ -2.27
SKP1-207ENST00000520417 SURF2Q15527 256 aaPredicted RBP0.88□□□□□ -2.27
SKP1-207ENST00000520417 HIST3H3Q16695 136 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 GUK1Q16774 197 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 Q1T7F1 81 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 DCXRQ7Z4W1 244 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 TRAPPC5Q8IUR0 188 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 OR1M1Q8NGA1 313 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 GPR32P1Q8NGA4 272 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 OR2T4Q8NH00 348 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 KLK6Q92876 244 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 OPTNQ96CV9 577 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 DCUN1D1Q96GG9 259 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 PPP1R2P1Q96PQ5 205 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 VPS29Q9UBQ0 182 aa0.88□□□□□ -2.27
SKP1-207ENST00000520417 RSL24D1Q9UHA3 163 aaKnown RBP0.88□□□□□ -2.27
SKP1-207ENST00000520417 REREQ9P2R6 1566 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 LST1O00453 97 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 PRM2P04554 102 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 IFNA16P05015 189 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 CD79AP11912 226 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 CCL5P13501 91 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 DEFA1P59665 94 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 RAB5BP61020 215 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 PSME3P61289 254 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 RPL18Q07020 188 aaKnown RBP0.87□□□□□ -2.27
SKP1-207ENST00000520417 SPA17Q15506 151 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 NDUFA5Q16718 116 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 FAM27BQ5VT28 67 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 UNQ6190/PRO20217Q6UXQ8 127 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 BPIFA4PQ86YQ2 179 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 C20orf196Q8IYI0 205 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 DEFB125Q8N687 156 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 ANKRD29Q8N6D5 301 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 OR8J2Q8NGG1 315 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 OR8B3Q8NGG8 313 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 SLC35B4Q969S0 331 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 RETNLBQ9BQ08 111 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 ADAT1Q9BUB4 502 aaKnown RBP0.87□□□□□ -2.27
SKP1-207ENST00000520417 PARD6GQ9BYG4 376 aaPredicted RBP0.87□□□□□ -2.27
SKP1-207ENST00000520417 COMMD5Q9GZQ3 224 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 OR51V1Q9H2C8 321 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 EFCAB1Q9HAE3 211 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 CMTM6Q9NX76 183 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 FUT9Q9Y231 359 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 PKIGQ9Y2B9 76 aa0.87□□□□□ -2.27
SKP1-207ENST00000520417 DICER1Q9UPY3 1922 aaKnown RBP0.86□□□□□ -2.27
SKP1-207ENST00000520417 A0A0J9YY10 115 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 A0A1B0GX78 115 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 TRAPPC13A5PLN9 417 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 OR51F1A6NGY5 319 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 FABP5P3A8MUU1 101 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 PSMD12O00232 456 aaPredicted RBP0.86□□□□□ -2.27
SKP1-207ENST00000520417 SDCBPO00560 298 aaPredicted RBP0.86□□□□□ -2.27
SKP1-207ENST00000520417 MRPS14O60783 128 aaKnown RBP0.86□□□□□ -2.27
SKP1-207ENST00000520417 KRT75O95678 551 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 CRYZL1O95825 349 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 HLA-DRB1P01911 266 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 OR5G3P0C626 314 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 RPS4Y1P22090 263 aaKnown RBP0.86□□□□□ -2.27
SKP1-207ENST00000520417 HBA1P69905 142 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms