RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 RPS10P46783 165 aaKnown RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 TTPAP49638 278 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 CCL18P55774 89 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 RPL23P62829 140 aaKnown RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 CRADDP78560 199 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 RPL18AQ02543 176 aaKnown RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 POU6F1Q14863 301 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 TSNQ15631 228 aaKnown RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF79Q15937 498 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 CLEC12AQ5QGZ9 265 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 TMEM69Q5SWH9 247 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 OTPQ5XKR4 325 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 THOC7Q6I9Y2 204 aaKnown RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 TRMT10CQ7L0Y3 403 aaKnown RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 SLC36A1Q7Z2H8 476 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 LRRC6Q86X45 466 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 LINC00612Q8N6U2 182 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 C5orf56Q8N8D9 126 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 Q8NAQ8 132 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 OR2AE1Q8NHA4 323 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 GHSRQ92847 366 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 TM4SF18Q96CE8 201 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 Q96MT0 163 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 RDH12Q96NR8 316 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 TMEM243Q9BU79 118 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 SAV1Q9H4B6 383 aaPredicted RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 VAPAQ9P0L0 249 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 NUFIP1Q9UHK0 495 aaKnown RBP2.01□□□□□ -2.09
CPNE3-204ENST00000517862 FBXO5Q9UKT4 447 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 HDGFL3Q9Y3E1 203 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 ASB4Q9Y574 426 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 ATP6V1DQ9Y5K8 247 aa2.01□□□□□ -2.09
CPNE3-204ENST00000517862 IGKV1-27A0A075B6S5 117 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 IGHV3OR15-7A0A075B7D8 119 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 TRAV8-4A0A0B4J246 113 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 ODF3BA8MYP8 253 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 J3QT63 122 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 SGCEO43556 437 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF861PO60384 105 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 DHRS3O75911 302 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 IGKV1D-16P01601 117 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 P01737 135 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 RPS3P23396 243 aaKnown RBP eCLIP2□□□□□ -2.094e-6■■■■□ 22.8
CPNE3-204ENST00000517862 PSMB6P28072 239 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 CD40LGP29965 261 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 KDELR2P33947 212 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 APLNRP35414 380 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 TALDO1P37837 337 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 RAP1GDS1P52306 607 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 SYNJ2BPP57105 145 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 ELF3P78545 371 aaPredicted RBP2□□□□□ -2.09
CPNE3-204ENST00000517862 SARNPP82979 210 aaKnown RBP2□□□□□ -2.09
CPNE3-204ENST00000517862 CDK5Q00535 292 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 PRKCDQ05655 676 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 ERCC8Q13216 396 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 C6orf99Q4VX62 202 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 ORMDL2Q53FV1 153 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 TMEM236Q5W0B7 351 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 CLEC19AQ6UXS0 136 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 TCF23Q7RTU1 214 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 RIMKLAQ8IXN7 391 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 LINC00469Q8N7U9 141 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 OR52P1PQ8NH57 321 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 OR6X1Q8NH79 312 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 SFXN5Q8TD22 340 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 RNASEH2CQ8TDP1 164 aaKnown RBP2□□□□□ -2.09
CPNE3-204ENST00000517862 HAVCR2Q8TDQ0 301 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 RXFP4Q8TDU9 374 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 SLC7A6Q92536 515 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 CDS1Q92903 461 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 KCNS1Q96KK3 526 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 RNF157Q96PX1 679 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 TIMM17AQ99595 171 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 PDCD1LG2Q9BQ51 273 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 C7orf50Q9BRJ6 194 aaKnown RBP2□□□□□ -2.09
CPNE3-204ENST00000517862 MS4A8Q9BY19 250 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF436Q9C0F3 470 aaPredicted RBP2□□□□□ -2.09
CPNE3-204ENST00000517862 SRRQ9GZT4 340 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 SLC38A1Q9H2H9 487 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 PARVBQ9HBI1 364 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 RHBDL2Q9NX52 303 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 TAS2R9Q9NYW1 312 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 CELA1Q9UNI1 258 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 SIGLEC7Q9Y286 467 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF443Q9Y2A4 671 aaPredicted RBP2□□□□□ -2.09
CPNE3-204ENST00000517862 LINC00588Q9Y4M8 146 aa2□□□□□ -2.09
CPNE3-204ENST00000517862 IGKV3D-20A0A0C4DH25 116 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 A0A1B0GW64 132 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 H0Y9J4 135 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 DNASE2O00115 360 aaPredicted RBP1.99□□□□□ -2.09
CPNE3-204ENST00000517862 TRBV12-3P01733 135 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR5AL1P0C617 328 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF3P17036 446 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 POLR2IP36954 125 aaKnown RBP1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR10A3P58181 314 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 HERVK_113P61574 105 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 CNBPP62633 177 aaKnown RBP1.99□□□□□ -2.09
CPNE3-204ENST00000517862 RAP1AP62834 184 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 237.4 ms