RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TCF19Q9Y242 345 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 PAM16Q9Y3D7 125 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 RNF115Q9Y4L5 304 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 LOC102723996A0A087X1L8 192 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 H3BTX0 84 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 SMPD2O60906 423 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 EGR1P18146 543 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMPRSS3P57727 454 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 ZFP36L1Q07352 338 aaKnown RBP9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 ZIC4Q8N9L1 334 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMEM45BQ96B21 275 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 IDI2-AS1Q9NZ38 188 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMEM250H0YL14 139 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 CD40P25942 277 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 GLRXP35754 106 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 FOXG1P55316 489 aaPredicted RBP9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 JOSD1Q15040 202 aaPredicted RBP9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 NMSQ5H8A3 153 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 CDPF1Q6NVV7 123 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 OR5AU1Q8NGC0 362 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 SFXN3Q9BWM7 321 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 THADAQ6YHU6 1953 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 PPIAL4CA0A0B4J2A2 164 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 PPIAL4GP0DN37 164 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 OTX1P32242 354 aaPredicted RBP9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 FGFBP3Q8TAT2 258 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 TRBV24-1A0A075B6N3 115 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 PINLYPA6NC86 204 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 M0R2Z0 102 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 IGHV1-2P23083 117 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 PRNTQ86SH4 94 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 ZCCHC24Q8N2G6 241 aaKnown RBP9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 MUC15Q8N387 334 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 ELOVL1Q9BW60 279 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 C1QTNF5Q9BXJ0 243 aa9.12□□□□□ -0.95
PCDHGA1-202ENST00000517417 FOXI3A8MTJ6 420 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 AMBPP02760 352 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 PRSS1P07477 247 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 TIMM23BQ5SRD1 257 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 ARL6IP6Q8N6S5 226 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 TCTEX1D1Q8N7M0 179 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 NDUFAF3Q9BU61 184 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 SH2D7A6NKC9 451 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 BMI1P35226 326 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 LHX2P50458 406 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 MMD2Q8IY49 270 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 C9orf106Q8NAJ2 232 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 VN1R17PQ8TDU5 208 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMEM242Q9NWH2 141 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 WDR87Q6ZQQ6 2873 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 MPDU1O75352 247 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 CLDN18P56856 261 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 JPT1Q9UK76 154 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 HIGD1AQ9Y241 93 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 TRAV1-1A0A0B4J248 108 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 M0QZK8 103 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 GGCTO75223 188 aaKnown RBP9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 CYB5R2Q6BCY4 276 aa9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 RBM14Q96PK6 669 aaKnown RBP9.11□□□□□ -0.95
PCDHGA1-202ENST00000517417 IGHV1-69-2A0A0G2JMI3 117 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 PGPA6NDG6 321 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 CGB1A6NKQ9 187 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 FAM90A26D6RGX4 464 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 TFF1P04155 84 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 PEAR1Q5VY43 1037 aaPredicted RBP9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 FAM90A2PQ658T7 463 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 OR13A1Q8NGR1 328 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 WDYHV1Q96HA8 205 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 ATG2AQ2TAZ0 1938 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 SSX8Q7RTT4 187 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 OR4A5Q8NH83 315 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 GRIFINA4D1Z8 144 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 RPL30P62888 115 aaKnown RBP9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 ACP7Q6ZNF0 438 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 CUL9Q8IWT3 2517 aa9.1□□□□□ -0.95
PCDHGA1-202ENST00000517417 ZNF716A6NP11 495 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMEM50AO95807 157 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 CLEC2AQ6UVW9 174 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 NPIPB3Q92617 1050 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 HSPB9Q9BQS6 159 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 QTRT1Q9BXR0 403 aaKnown RBP9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 GP6Q9HCN6 339 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 IGHV2OR16-5A0A0B4J2B6 119 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 ETV2O00321 342 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 TFPI2P48307 235 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 TFF3Q07654 80 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 ZNF124Q15973 351 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 SLC35E4Q6ICL7 350 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 PNKDQ8N490 385 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 OR9G1Q8NH87 305 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMEM170AQ8WVE7 144 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 GTF3AQ92664 365 aaKnown RBP9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 MUC22E2RYF6 1773 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms