RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 ANKRD55Q3KP44 614 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
PDCD6-211ENST00000515587 LRTM2Q8N967 370 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 DUSP18Q8NEJ0 188 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 OR5T1Q8NG75 326 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 SRSF8Q9BRL6 282 aaKnown RBP11.81□□□□□ -0.52
PDCD6-211ENST00000515587 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
PDCD6-211ENST00000515587 COA4Q9NYJ1 87 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 CACFD1Q9UGQ2 172 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 ZNF257Q9Y2Q1 563 aa11.81□□□□□ -0.52
PDCD6-211ENST00000515587 PRKDCP78527 4128 aaKnown RBP11.8□□□□□ -0.52
PDCD6-211ENST00000515587 TEX22C9J3V5 150 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 H3BUA1 57 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 DHFRP00374 187 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 SULT1A3P0DMM9 295 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 SULT1A4P0DMN0 295 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 DCTN2Q13561 401 aaKnown RBP11.8□□□□□ -0.52
PDCD6-211ENST00000515587 LYZL2Q7Z4W2 148 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 FAM110DQ8TAY7 271 aaPredicted RBP11.8□□□□□ -0.52
PDCD6-211ENST00000515587 GPR146Q96CH1 333 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 CITED2Q99967 270 aaPredicted RBP11.8□□□□□ -0.52
PDCD6-211ENST00000515587 ZFP57Q9NU63 452 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 CACNG5Q9UF02 275 aa11.8□□□□□ -0.52
PDCD6-211ENST00000515587 TSSC4Q9Y5U2 329 aaPredicted RBP11.8□□□□□ -0.52
PDCD6-211ENST00000515587 A0A0B4J293 547 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 A0A0G2JRQ6 117 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 HMX3A6NHT5 357 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 CYB5BO43169 146 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 PTTG1O95997 202 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 IFNA21P01568 189 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 IFNA17P01571 189 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 PSMB8P28062 276 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 HSPE1P61604 102 aaKnown RBP11.79□□□□□ -0.52
PDCD6-211ENST00000515587 CD83Q01151 205 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 ASPHD1Q5U4P2 390 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 TTC9CQ8N5M4 171 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 GPN1Q9HCN4 374 aaPredicted RBP11.79□□□□□ -0.52
PDCD6-211ENST00000515587 NDUFA4L2Q9NRX3 87 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 TMED3Q9Y3Q3 217 aa11.79□□□□□ -0.52
PDCD6-211ENST00000515587 NPIPB5A8MRT5 1133 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 E7EUB6 86 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 INMT-MINDY4F8WBC2 141 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 ST8SIA3O43173 380 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 PRAF2O60831 178 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 HOXB5P09067 269 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 RAB9AP51151 201 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 TPPP2P59282 170 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 PRCDQ00LT1 54 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 SMCO1Q147U7 214 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 NSUN5P1Q3KNT7 163 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 PRR31Q5SQ13 230 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 OR52B4Q8NGK2 314 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 ZNF431Q8TF32 576 aaPredicted RBP11.78□□□□□ -0.52
PDCD6-211ENST00000515587 MITD1Q8WV92 249 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 MS4A10Q96PG2 267 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 PLEKHA3Q9HB20 300 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 ENY2Q9NPA8 101 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 TRRAPQ9Y4A5 3859 aa11.78□□□□□ -0.52
PDCD6-211ENST00000515587 A0A1B0GU03 582 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 A0A1B0GW64 132 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 CGB1A6NKQ9 187 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 DBX1A6NMT0 343 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 NUDT19A8MXV4 375 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 M0QZ24 198 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 SOX15O60248 233 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 TRGV3P03979 118 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 IL5P05113 134 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.53
PDCD6-211ENST00000515587 OR13C7P0DN81 318 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 DEFA4P12838 97 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 AREGP15514 252 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 PSMB6P28072 239 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 C2orf68Q2NKX9 166 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 OR1S1Q8NH92 325 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 SEC22CQ9BRL7 303 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 MARVELD1Q9BSK0 173 aa11.77□□□□□ -0.53
PDCD6-211ENST00000515587 A0A0G2JLM5 398 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 IGLC7A0M8Q6 106 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 BRI3O95415 125 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 REG1AP05451 166 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 SLC25A6P12236 298 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 HIST1H1BP16401 226 aaKnown RBP11.76□□□□□ -0.53
PDCD6-211ENST00000515587 HOXA1P49639 335 aaPredicted RBP11.76□□□□□ -0.53
PDCD6-211ENST00000515587 SPCS3P61009 180 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 RPL23AP62750 156 aaKnown RBP11.76□□□□□ -0.53
PDCD6-211ENST00000515587 RGS21Q2M5E4 152 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 GGNBP1Q5YKI7 109 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 Q6ZRM9 215 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
PDCD6-211ENST00000515587 C12orf45Q8N5I9 185 aaPredicted RBP11.76□□□□□ -0.53
PDCD6-211ENST00000515587 UXS1Q8NBZ7 420 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms