RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 FANCD2OSQ96PS1 177 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 OR4C12Q96R67 309 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 TMEM14BQ9NUH8 114 aa9.8□□□□□ -0.84
CLCN3-210ENST00000515420 ZNF256Q9Y2P7 627 aaPredicted RBP9.8□□□□□ -0.84
CLCN3-210ENST00000515420 IGLV11-55A0A075B6I3 123 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 TEX50A0A1B0GTY4 177 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 ANKRD20A5PA0PJZ0 165 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 FABP12A6NFH5 140 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 CCDC160A6NGH7 325 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 C15orf61A6NNL5 157 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 DISC1C4P0D8 188 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 CYB5BO43169 146 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 OR2J3O76001 311 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 CTSDP07339 412 aaPredicted RBP9.79□□□□□ -0.84
CLCN3-210ENST00000515420 TRAPPC2P0DI81 140 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 TRAPPC2BP0DI82 140 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 DEFA4P12838 97 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 MYOD1P15172 320 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 PPP5CP53041 499 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 RPEL1Q2QD12 228 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 SCGB2B2Q4G0G5 96 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 OR9G4Q8NGQ1 327 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 LSM10Q969L4 123 aaKnown RBP9.79□□□□□ -0.84
CLCN3-210ENST00000515420 CXorf58Q96LI9 332 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 PRRT1Q99946 306 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 NDUFA4L2Q9NRX3 87 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 SIGLEC8Q9NYZ4 499 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 THYN1Q9P016 225 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 FBXL7Q9UJT9 491 aa9.79□□□□□ -0.84
CLCN3-210ENST00000515420 TRBV7-1A0A0A6YYK4 115 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 C3orf85A0A1B0GTC6 90 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 BMPR1BO00238 502 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 ATG12O94817 140 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 TRBV12-3P01733 135 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 H2BFWTQ7Z2G1 175 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 GDPD1Q8N9F7 314 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 OR4C16Q8NGL9 310 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 OR13C8Q8NGS7 320 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 TMEM56Q96MV1 263 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 SLC2A8Q9NY64 477 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 COPZ2Q9P299 210 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 OR51B2Q9Y5P1 312 aa9.78□□□□□ -0.84
CLCN3-210ENST00000515420 IGLV1-51P01701 117 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 PI3P19957 117 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 S100A5P33763 92 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 SYNJ2BPP57105 145 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 DEFB121Q5J5C9 76 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 OR1L6Q8NGR2 347 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 MARCH1Q8TCQ1 289 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 DEDD2Q8WXF8 326 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 MRGPRFQ96AM1 343 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 CCDC140Q96MF4 163 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 TP53RKQ96S44 253 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 ATP6V0BQ99437 205 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 PEMTQ9UBM1 199 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 C14orf166Q9Y224 244 aaKnown RBP9.77□□□□□ -0.85
CLCN3-210ENST00000515420 LSM4Q9Y4Z0 139 aaKnown RBP9.77□□□□□ -0.85
CLCN3-210ENST00000515420 DMRT1Q9Y5R6 373 aa9.77□□□□□ -0.85
CLCN3-210ENST00000515420 GGCTO75223 188 aaKnown RBP9.76□□□□□ -0.85
CLCN3-210ENST00000515420 NDUFB8O95169 186 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 REG1AP05451 166 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 OR13C7P0DN81 318 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 UCP1P25874 307 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 WT1-ASQ06250 92 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 FAAP20Q6NZ36 180 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 IL34Q6ZMJ4 242 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 C19orf35Q6ZS72 473 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 OR10W1Q8NGF6 305 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 VN1R17PQ8TDU5 208 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 SCGB3A2Q96PL1 93 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 PRR25Q96S07 402 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 B9D2Q9BPU9 175 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 SCP2D1Q9UJQ7 156 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 GPR132Q9UNW8 380 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 NSG2Q9Y328 171 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 F11RQ9Y624 299 aaKnown RBP9.76□□□□□ -0.85
CLCN3-210ENST00000515420 V9GYH0 126 aa9.76□□□□□ -0.85
CLCN3-210ENST00000515420 LGALS9O00182 355 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 P0C879 139 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 FAUP35544 74 aaKnown RBP9.75□□□□□ -0.85
CLCN3-210ENST00000515420 ARL3P36405 182 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 AKR1C2P52895 323 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 AP3S2P59780 193 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 CCDC190Q86UF4 302 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 GPHB5Q86YW7 130 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 FAM219AQ8IW50 185 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 ZNF114Q8NC26 417 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 OR51S1Q8NGJ8 323 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 OR2K2Q8NGT1 345 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 RTBDNQ9BSG5 229 aaPredicted RBP9.75□□□□□ -0.85
CLCN3-210ENST00000515420 THAP7Q9BT49 309 aaPredicted RBP9.75□□□□□ -0.85
CLCN3-210ENST00000515420 TMEM222Q9H0R3 208 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 C5orf66Q9H5L9 145 aa9.75□□□□□ -0.85
CLCN3-210ENST00000515420 MFSD2BA6NFX1 497 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 DBX1A6NMT0 343 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms