RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 QTRT1Q9BXR0 403 aaKnown RBP8.75□□□□□ -1.01
VCAN-212ENST00000515397 CEPT1Q9Y6K0 416 aa8.75□□□□□ -1.01
VCAN-212ENST00000515397 IGLV11-55A0A075B6I3 123 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 CCDC160A6NGH7 325 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 GABARAPH6UMI1 98 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 SNAPC5O75971 98 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 CLEC3BP05452 202 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 MFAP2P55001 183 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 PIGPP57054 158 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 STEAP1BQ6NZ63 245 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 LHFPL1Q86WI0 220 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 TMEM229BQ8NBD8 167 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 MARCH1Q8TCQ1 289 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 SEC22AQ96IW7 307 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 TP53RKQ96S44 253 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 SLIRPQ9GZT3 109 aaKnown RBP8.74□□□□□ -1.01
VCAN-212ENST00000515397 NDUFA4L2Q9NRX3 87 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 CCDC59Q9P031 241 aaKnown RBP8.74□□□□□ -1.01
VCAN-212ENST00000515397 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
VCAN-212ENST00000515397 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 NOL3O60936 208 aaKnown RBP8.73□□□□□ -1.01
VCAN-212ENST00000515397 GGCTO75223 188 aaKnown RBP8.73□□□□□ -1.01
VCAN-212ENST00000515397 DHFRP00374 187 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 CD74P04233 296 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 SERPINE2P07093 398 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 S100GP29377 79 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 TNFSF8P32971 234 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 ARL3P36405 182 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 TAS2R19P59542 299 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 H2BFWTQ7Z2G1 175 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 SBSPONQ8IVN8 264 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 OR13C8Q8NGS7 320 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 TERB2Q8NHR7 220 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 CACNG8Q8WXS5 425 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 EEF1AKMT3Q96AZ1 226 aa8.73□□□□□ -1.01
VCAN-212ENST00000515397 IGKV1-5P01602 117 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 IGHV3-48P01763 117 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 HIST1H1BP16401 226 aaKnown RBP8.72□□□□□ -1.01
VCAN-212ENST00000515397 GPR183P32249 361 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 MECP2P51608 486 aaKnown RBP8.72□□□□□ -1.01
VCAN-212ENST00000515397 Q8N1Y9 231 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 ARRDC1Q8N5I2 433 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 GDPD1Q8N9F7 314 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 OR4A16Q8NH70 328 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 MCFD2Q8NI22 146 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 COPZ2Q9P299 210 aa8.72□□□□□ -1.01
VCAN-212ENST00000515397 TENM3Q9P273 2699 aa8.71□□□□□ -1.01
VCAN-212ENST00000515397 IGHV3OR16-8A0A075B7F1 116 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 C3orf85A0A1B0GTC6 90 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 FABP12A6NFH5 140 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 OR2T8A6NH00 312 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 C2orf70A6NJV1 201 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 C15orf61A6NNL5 157 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 TPPPO94811 219 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 FOLR2P14207 255 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 CD300EQ496F6 205 aaPredicted RBP8.71□□□□□ -1.02
VCAN-212ENST00000515397 TM4SF20Q53R12 229 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 UNQ9165/PRO28630Q6UXU0 137 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 OR4C16Q8NGL9 310 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 ZNF502Q8TBZ5 544 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 C15orf40Q8WUR7 153 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 SMIM4Q8WVI0 70 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 LSM10Q969L4 123 aaKnown RBP8.71□□□□□ -1.02
VCAN-212ENST00000515397 BCL7BQ9BQE9 202 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 RTBDNQ9BSG5 229 aaPredicted RBP8.71□□□□□ -1.02
VCAN-212ENST00000515397 TMEM14BQ9NUH8 114 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 PEMTQ9UBM1 199 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 PRNDQ9UKY0 176 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 STAB2Q8WWQ8 2551 aa8.71□□□□□ -1.02
VCAN-212ENST00000515397 A0A0B4J293 547 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 A0A0G2JRQ6 117 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 DISC1C4P0D8 188 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 TBPP20226 339 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 PTBP1P26599 531 aaKnown RBP eCLIP8.7□□□□□ -1.02
VCAN-212ENST00000515397 RND3P61587 244 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 DCTN2Q13561 401 aaKnown RBP8.7□□□□□ -1.02
VCAN-212ENST00000515397 KLK9Q2XQG4 91 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 TRIM16LQ309B1 348 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 DEFB114Q30KQ6 69 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 UBAC2Q8NBM4 344 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 OR51S1Q8NGJ8 323 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 ZFAND1Q8TCF1 268 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 DYNLRB2Q8TF09 96 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 MISP3Q96FF7 219 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 SOSTQ9BQB4 213 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 CHRDL1Q9BU40 450 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 PRR13Q9NZ81 148 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 KLK9Q9UKQ9 250 aa8.7□□□□□ -1.02
VCAN-212ENST00000515397 F11RQ9Y624 299 aaKnown RBP8.7□□□□□ -1.02
VCAN-212ENST00000515397 TRBV7-1A0A0A6YYK4 115 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 H0Y980 276 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 K7EIM0 57 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 CTDSPLO15194 276 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 ZNF207O43670 478 aaKnown RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 CTSDP07339 412 aaPredicted RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 OR5AC1P0C628 307 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 AKAIN1P0CW23 69 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 IGHV4-30-4P0DP06 118 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms