RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
TCOF1-214ENST00000515035 TRAV9-2A0A087WT02 112 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 TRAV24A0A0B4J272 114 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 FOXI3A8MTJ6 420 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-214ENST00000515035 TMEM50AO95807 157 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 CELA2AP08217 269 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-214ENST00000515035 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 FGF16O43320 207 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 ADMP35318 185 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 FHL5Q5TD97 284 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 NHP2Q9NX24 153 aaKnown RBP11.28□□□□□ -0.6
TCOF1-214ENST00000515035 LOC390937A0A1W2PQ73 354 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 A6NNC1 897 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 HEPN1Q6WQI6 88 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 DIRC2Q96SL1 478 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 SIGMAR1Q99720 223 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 DIDO1Q9BTC0 2240 aaKnown RBP11.28□□□□□ -0.6
TCOF1-214ENST00000515035 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 THY1P04216 161 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 PF4V1P10720 104 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 EGR4Q05215 589 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 C10orf128Q5T292 105 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 CTHRC1Q96CG8 243 aa11.28□□□□□ -0.6
TCOF1-214ENST00000515035 WNT9BO14905 357 aa11.27□□□□□ -0.6
TCOF1-214ENST00000515035 ZXDCQ2QGD7 858 aaPredicted RBP11.27□□□□□ -0.6
TCOF1-214ENST00000515035 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.6
TCOF1-214ENST00000515035 PEAR1Q5VY43 1037 aaPredicted RBP11.27□□□□□ -0.6
TCOF1-214ENST00000515035 ZNF525Q8N782 197 aa11.27□□□□□ -0.6
TCOF1-214ENST00000515035 RPP21Q9H633 154 aaKnown RBP11.27□□□□□ -0.6
TCOF1-214ENST00000515035 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.6
TCOF1-214ENST00000515035 ABCA1O95477 2261 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 IGFBP2P18065 325 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 SUMO2P61956 95 aaKnown RBP11.27□□□□□ -0.61
TCOF1-214ENST00000515035 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 NPIPB4C9JG80 1138 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 ANAPC13Q9BS18 74 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 TM2D1Q9BX74 207 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 ZNF646O15015 1829 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-214ENST00000515035 CCL21O00585 134 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 C1QTNF9P0C862 333 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 SCGB3A1Q96QR1 104 aa11.27□□□□□ -0.61
TCOF1-214ENST00000515035 F8VVB4 439 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 F8VWA3 439 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 TEX29Q8N6K0 151 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 PGPEP1LA6NFU8 196 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 COLCA2A8K830 154 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 HIGD1CA8MV81 97 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 IGHMP01871 453 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 OR2K2Q8NGT1 345 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 GVINP1Q7Z2Y8 2422 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 RAB9AP51151 201 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-214ENST00000515035 NPIPB13A6NJU9 1138 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 COX5BP10606 129 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 CSRP2Q16527 193 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 C1orf185Q5T7R7 199 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 WDR82Q6UXN9 313 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 OR5A1Q8NGJ0 315 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 IFI27L2Q9H2X8 130 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 CEP250Q9BV73 2442 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 SCN10AQ9Y5Y9 1956 aa11.26□□□□□ -0.61
TCOF1-214ENST00000515035 H0YIZ8 118 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 ORMDL3Q8N138 153 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 IGHV3-35A0A0C4DH35 117 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 GFI1BQ5VTD9 330 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 DNM1P46Q6ZS02 220 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 KLF14Q8TD94 323 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-214ENST00000515035 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 ADRA2AP08913 450 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
TCOF1-214ENST00000515035 RPL39P5Q59GN2 51 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 ELOVL5Q9NYP7 299 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 M0R381 172 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 DLEU1O43261 78 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 OR9G1Q8NH87 305 aa11.25□□□□□ -0.61
TCOF1-214ENST00000515035 RNASE7Q9H1E1 156 aaKnown RBP11.25□□□□□ -0.61
TCOF1-214ENST00000515035 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 PROB1E7EW31 1015 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 CEACAM1P13688 526 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 TMEM186Q96B77 213 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 IGKV3OR2-268A0A0C4DH90 116 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 A0A1B0GW15 77 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 PSMB11A5LHX3 300 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 SMIM10L1P0DMW3 83 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 SMIM10Q96HG1 83 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 AMBPP02760 352 aa11.24□□□□□ -0.61
TCOF1-214ENST00000515035 ZNF883P0CG24 379 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms