RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 WNT10AQ9GZT5 417 aa9.43□□□□□ -0.9
PDLIM5-220ENST00000514830 A0A1W2PN81 502 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 IGLC7A0M8Q6 106 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 MSGN1A6NI15 193 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 SH2D7A6NKC9 451 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 LINC01548A6NM66 108 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 NPIPB5A8MRT5 1133 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 E7EUB6 86 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 CCSO14618 274 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 GOSR2O14653 212 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 RBMXL2O75526 392 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 MED6O75586 246 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 CRYGCP07315 174 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 CHRNA7P36544 502 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 VDAC2P45880 294 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 ATP5IP56385 69 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 H2BFSP57053 126 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 GNB1P62873 340 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 CFHR3Q02985 330 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 FCN2Q15485 313 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 C10orf55Q5SWW7 151 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 STPG2Q8N412 459 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 TTC9CQ8N5M4 171 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 ZNF114Q8NC26 417 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 OR11H7Q8NGC8 314 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 WIPF2Q8TF74 440 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 ZFP57Q9NU63 452 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 MGAT4CQ9UBM8 478 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 FBXO7Q9Y3I1 522 aa9.42□□□□□ -0.9
PDLIM5-220ENST00000514830 TRAV41A0A0B4J266 112 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 C13orf42A0A1B0GVH6 325 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 C5orf51A6NDU8 294 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 HMX3A6NHT5 357 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 H3BUA1 57 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 IFNA17P01571 189 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 MYOD1P15172 320 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 CXCL3P19876 107 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 PPIFP30405 207 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 NKX2-1P43699 371 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 CXorf66Q5JRM2 361 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 C9orf152Q5JTZ5 239 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 ASPHD1Q5U4P2 390 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 LINC01006Q8NI28 216 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 GRPEL2Q8TAA5 225 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 PARP11Q9NR21 331 aa9.41□□□□□ -0.9
PDLIM5-220ENST00000514830 CLPSL1A2RUU4 121 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 FAM25EA8MYX2 175 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 SYNGR2O43760 224 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 IGLV1-40P01703 118 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 MBPP02686 304 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 GIPP09681 153 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 CTRB1P17538 263 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 TAS2R30P59541 319 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 WT1-ASQ06250 92 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 FOXL1Q12952 345 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 CTRB2Q6GPI1 263 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 OR2C3Q8N628 320 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 COMMD1Q8N668 190 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 LFNGQ8NES3 379 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 FAM110DQ8TAY7 271 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 CIB3Q96Q77 187 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 C19orf24Q9BVV8 132 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 ZNF436Q9C0F3 470 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
PDLIM5-220ENST00000514830 SIX6O95475 246 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 IGHG4P01861 327 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 PSMB6P28072 239 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 PROK1P58294 105 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 RAP2BP61225 183 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 SLC35B1P78383 322 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 ERHP84090 104 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 UNQ5815/PRO19632Q6UWF5 114 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 OR10W1Q8NGF6 305 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 DTD1Q8TEA8 209 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 ABHD5Q8WTS1 349 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 RAB40CQ96S21 281 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 FAM103A1Q9BTL3 118 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 RBKSQ9H477 322 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 C11orf1Q9H5F2 150 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 GSKIPQ9P0R6 139 aa9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 RCL1Q9Y2P8 373 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-220ENST00000514830 G3V318 75 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 FBXO24O75426 580 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 OPN1MWP04001 364 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 OPN1MW2P0DN77 364 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 OPN1MW3P0DN78 364 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 AREGP15514 252 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 HTR2BP41595 481 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 BCAP31P51572 246 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 TMEM95Q3KNT9 176 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 OR1P1Q8NH06 330 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms