RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TMEM246Q9BRR3 403 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 SHARPINQ9H0F6 387 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 CALYQ9NYX4 217 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 IDI2-AS1Q9NZ38 188 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 KAAG1Q9UBP8 84 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 CLN8Q9UBY8 286 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 NSG2Q9Y328 171 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 EML6Q6ZMW3 1958 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 FREM3P0C091 2139 aa3.61□□□□□ -1.83
CLDND1-228ENST00000513873 IGHV3OR15-7A0A075B7D8 119 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 DEFB108AA8MXU0 73 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 K7EPK0 472 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TOR1AO14656 332 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 ARPC5O15511 151 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 RBFOX2O43251 390 aaKnown RBP eCLIP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 MPC2O95563 127 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 HRASP01112 189 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 APOHP02749 345 aaPredicted RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 RBP4P02753 201 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TPT1P13693 172 aaKnown RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 UCP1P25874 307 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 NKX2-1P43699 371 aaPredicted RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 P2RY1P47900 373 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 CEBPDP49716 269 aaPredicted RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 S100A10P60903 97 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 RPL23AP62750 156 aaKnown RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 UBA52P62987 128 aaKnown RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 CX3CL1P78423 397 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TFF3Q07654 80 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF266Q14584 549 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM187Q14656 261 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 OPCMLQ14982 345 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 RTL8BQ17RB0 113 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 ANKRD55Q3KP44 614 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 LRRC37A5PQ49AS3 106 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 MORN2Q502X0 79 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 FAM71F2Q6NXP2 309 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF818PQ6ZRF7 136 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TMUB2Q71RG4 321 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 RTN4RL2Q86UN3 420 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 C9orf62Q8N4C0 152 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 C8orf31Q8N9H6 132 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 ZNRF1Q8ND25 227 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 OR51H1Q8NH63 302 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 OR4S2Q8NH73 311 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 OR1S1Q8NH92 325 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TCTEX1D2Q8WW35 142 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM158Q8WZ71 300 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 H1FXQ92522 213 aaKnown RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 TMEM230Q96A57 120 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 MRGPRFQ96AM1 343 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 COQ2Q96H96 371 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 SEC22AQ96IW7 307 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 ZNF714Q96N38 554 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 GAFA1Q96PS6 74 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 CIB3Q96Q77 187 aaPredicted RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 RAB40CQ96S21 281 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 CCL13Q99616 98 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 SMR3AQ99954 134 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 ARL6Q9H0F7 186 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 OR2D2Q9H210 308 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 LINC00574Q9H8X3 128 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 CCL28Q9NRJ3 127 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 FKBP11Q9NYL4 201 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 UBQLN2Q9UHD9 624 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 AMMECR1Q9Y4X0 333 aaPredicted RBP3.6□□□□□ -1.83
CLDND1-228ENST00000513873 PCNX3Q9H6A9 2034 aa3.6□□□□□ -1.83
CLDND1-228ENST00000513873 IGKV1-6A0A0C4DH72 117 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 C19orf84I3L1E1 186 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 TXNL1O43396 289 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 PPIHO43447 177 aaKnown RBP3.59□□□□□ -1.83
CLDND1-228ENST00000513873 BCL2L11O43521 198 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 DEDDO75618 318 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 DFFBO76075 338 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 SIX6O95475 246 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 HPRT1P00492 218 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 APOA2P02652 100 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 RPS2P15880 293 aaKnown RBP3.59□□□□□ -1.83
CLDND1-228ENST00000513873 S100A1P23297 94 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 NFYBP25208 207 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 MC5RP33032 325 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 CEACAM3P40198 252 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 RAB13P51153 203 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 EFNA4P52798 201 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 NKX2-5P52952 324 aaPredicted RBP3.59□□□□□ -1.83
CLDND1-228ENST00000513873 TAS2R30P59541 319 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 GNB2P62879 340 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 SUPT4H1P63272 117 aaKnown RBP3.59□□□□□ -1.83
CLDND1-228ENST00000513873 HBG1P69891 147 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 HBG2P69892 147 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 BAXQ07812 192 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 HERPUD1Q15011 391 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 SP6Q3SY56 376 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 TEX261Q6UWH6 196 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 HEPN1Q6WQI6 88 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 H2BFWTQ7Z2G1 175 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 STX12Q86Y82 276 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 SELENOHQ8IZQ5 122 aaKnown RBP3.59□□□□□ -1.83
CLDND1-228ENST00000513873 SPAG16Q8N0X2 631 aa3.59□□□□□ -1.83
CLDND1-228ENST00000513873 KCNRGQ8N5I3 272 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms