RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 IGLV2-11P01706 119 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 ZNF19P17023 458 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 RAB3AP20336 220 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 C4BPBP20851 252 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 TFPI2P48307 235 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 GTF2A1P52655 376 aaPredicted RBP3.39□□□□□ -1.87
HTT-211ENST00000513326 HERV-K104P61576 105 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 RPS27AP62979 156 aaKnown RBP3.39□□□□□ -1.87
HTT-211ENST00000513326 TNXAQ16473 311 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 PRSS8Q16651 343 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 DDI2Q5TDH0 399 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 XAF1Q6GPH4 301 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 CEACAM19Q7Z692 300 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 TRPT1Q86TN4 253 aaKnown RBP3.39□□□□□ -1.87
HTT-211ENST00000513326 GID4Q8IVV7 300 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 STPG4Q8N801 248 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 NECAP1Q8NC96 275 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 OR5D14Q8NGL3 314 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 CANT1Q8WVQ1 401 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 FCAMRQ8WWV6 532 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 GALMQ96C23 342 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 CMTM5Q96DZ9 223 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 GALNT14Q96FL9 552 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 UHRF2Q96PU4 802 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 SPAG8Q99932 426 aaPredicted RBP3.39□□□□□ -1.87
HTT-211ENST00000513326 SULT4A1Q9BR01 284 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 HDHD3Q9BSH5 251 aaPredicted RBP3.39□□□□□ -1.87
HTT-211ENST00000513326 C5orf66Q9H5L9 145 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 PIPOXQ9P0Z9 390 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 WARS2Q9UGM6 360 aaKnown RBP3.39□□□□□ -1.87
HTT-211ENST00000513326 ENOPH1Q9UHY7 261 aa3.39□□□□□ -1.87
HTT-211ENST00000513326 IGKV3-7A0A075B6H7 116 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 TRAV8-7A0A075B6U6 113 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 IGHV3-49A0A0A0MS15 119 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 IGKV1-6A0A0C4DH72 117 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 C5orf52A6NGY3 159 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 M0R1X1 148 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 CIDEAO60543 219 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 IFNA10P01566 189 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 REG1AP05451 166 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 CTSDP07339 412 aaPredicted RBP3.38□□□□□ -1.87
HTT-211ENST00000513326 CD3GP09693 182 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 SPP1P10451 314 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 ANXA8P13928 327 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 GTF2F2P13984 249 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 AREGP15514 252 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 PRDX6P30041 224 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 GPR183P32249 361 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 ZNF93P35789 620 aaPredicted RBP3.38□□□□□ -1.87
HTT-211ENST00000513326 XGP55808 180 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 HAMPP81172 84 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 SLC25A30Q5SVS4 291 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 LEMD1Q68G75 181 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 NRARPQ7Z6K4 114 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 DHFR2Q86XF0 187 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 PDPNQ86YL7 162 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 UBE2DNLQ8IWF7 75 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 SLC38A6Q8IZM9 456 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 TTC9CQ8N5M4 171 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 ACOT12Q8WYK0 555 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 CCDC124Q96CT7 223 aaKnown RBP3.38□□□□□ -1.87
HTT-211ENST00000513326 ZNF184Q99676 751 aaPredicted RBP3.38□□□□□ -1.87
HTT-211ENST00000513326 RNF5Q99942 180 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 NDUFAF3Q9BU61 184 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 SELENOIQ9C0D9 397 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 ZNF430Q9H8G1 570 aaPredicted RBP3.38□□□□□ -1.87
HTT-211ENST00000513326 SLC35D1Q9NTN3 355 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 CLEC5AQ9NY25 188 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 KCNIP1Q9NZI2 227 aa3.38□□□□□ -1.87
HTT-211ENST00000513326 EXOSC1Q9Y3B2 195 aaKnown RBP3.38□□□□□ -1.87
HTT-211ENST00000513326 DAPL1A0PJW8 107 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 GNGT2O14610 69 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 APOA2P02652 100 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 SMR3BP02814 79 aaPredicted RBP3.37□□□□□ -1.87
HTT-211ENST00000513326 RPSAP08865 295 aaKnown RBP3.37□□□□□ -1.87
HTT-211ENST00000513326 SCTP09683 121 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 SAA1P0DJI8 122 aaPredicted RBP3.37□□□□□ -1.87
HTT-211ENST00000513326 MGMTP16455 207 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 ATP6V1E1P36543 226 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 TMEM187Q14656 261 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 SOHLH1Q5JUK2 328 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 OR4A47Q6IF82 309 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 OR10K2Q6IF99 312 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 ZNF880Q6PDB4 577 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 GLIPR1L1Q6UWM5 242 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 TMEM182Q6ZP80 229 aaPredicted RBP3.37□□□□□ -1.87
HTT-211ENST00000513326 SSX9Q7RTT3 188 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 C6orf201Q7Z4U5 140 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 LHFPL3Q86UP9 236 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 NR2C2APQ86WQ0 139 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 VKORC1L1Q8N0U8 176 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 LYPD1Q8N2G4 141 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 OR5AK2Q8NH90 309 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 TMEM190Q8WZ59 177 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 FAAP24Q9BTP7 215 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms