RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 CD40P25942 277 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 CLDN12P56749 244 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 EWSR1Q01844 656 aaKnown RBP eCLIP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 SPANXN1Q5VSR9 72 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 GAPTQ8N292 157 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 IL17DQ8TAD2 202 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM106BQ9NUM4 274 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 KLK11Q9UBX7 282 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 KCNE3Q9Y6H6 103 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 A0A1B0GUT8 65 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 CT62P0C5K7 136 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 NHLH2Q02577 135 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 TNXAQ16473 311 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 ZNF474Q6S9Z5 364 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 NECAP1Q8NC96 275 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 GNB1LQ9BYB4 327 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 HIST3H3Q16695 136 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 FAM78BQ5VT40 261 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 MOGAT3Q86VF5 341 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM116Q8NCL8 245 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 RMI2Q96E14 147 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 SEC22AQ96IW7 307 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 CDIPTO14735 213 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 NBR2O15453 112 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 SRSF10O75494 262 aaKnown RBP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 NTN1O95631 604 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 DNAL4O96015 105 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 PRSS12P56730 875 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 UBE2V2Q15819 145 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 C19orf54Q5BKX5 351 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 KHDC1LQ5JSQ8 128 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 WDR25Q64LD2 544 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 C16orf54Q6UWD8 224 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 APCDD1LQ8NCL9 501 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 SEPSECSQ9HD40 501 aaKnown RBP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 PLSCR3Q9NRY6 295 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 TRBV6-7A0A0A0MS04 114 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 SPINT1O43278 529 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 OR2H2O95918 312 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 HLA-DRB1P01911 266 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 SRSF4Q08170 494 aaKnown RBP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 FAM159AQ6UWV7 190 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 Q6ZS52 159 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 TINAGL1Q9GZM7 467 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-209ENST00000511467 OR51B6Q9H340 312 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 PLAC1Q9HBJ0 212 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 OSTCQ9NRP0 149 aa4.18□□□□□ -1.74
PTPN13-209ENST00000511467 NBL1P41271 181 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 COL10A1Q03692 680 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 COL5A1-AS1Q5SY13 56 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TSPO2Q5TGU0 170 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TEX38Q6PEX7 206 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 ASCL4Q6XD76 172 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 C8orf46Q8TAG6 207 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 NDUFAF3Q9BU61 184 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 ELF5Q9UKW6 265 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-209ENST00000511467 CLDN16Q9Y5I7 305 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 RFNGQ9Y644 331 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 VAMP3Q15836 100 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 OR10J3Q5JRS4 329 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM255AQ5JRV8 349 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 CBLN3Q6UW01 205 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 Q6ZS92 163 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 C6orf201Q7Z4U5 140 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 SSMEM1Q8WWF3 244 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM133Q9H2Q1 129 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM189A5PLL7 270 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 J3QRE1 110 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM42Q69YG0 159 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 MRPL53Q96EL3 112 aaKnown RBP4.17□□□□□ -1.74
PTPN13-209ENST00000511467 AICDAQ9GZX7 198 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 CARHSP1Q9Y2V2 147 aaKnown RBP4.17□□□□□ -1.74
PTPN13-209ENST00000511467 SLC25A20O43772 301 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 FBLN7Q53RD9 439 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 IBA57Q5T440 356 aaKnown RBP4.17□□□□□ -1.74
PTPN13-209ENST00000511467 LINC01590Q5TEZ4 76 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 C9orf62Q8N4C0 152 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 SMIM3Q9BZL3 60 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 R3HDMLQ9H3Y0 253 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 PRDM13Q9H4Q3 707 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TRBV7-9A0A0J9YWB2 115 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 ZIC3O60481 467 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 PRSS53Q2L4Q9 553 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 CDCP2Q5VXM1 449 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 FAM90A2PQ658T7 463 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 OR8D4Q8NGM9 314 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 WNT5BQ9H1J7 359 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 COL4A3Q01955 1670 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TRAV21A0A0B4J279 112 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TBR1Q16650 682 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 C2orf83Q53S99 150 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 CYP2G1PQ6ZSU1 146 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 C9orf139Q6ZV77 190 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 IGFBP2P18065 325 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 IL15RAQ13261 267 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 LPAL2Q16609 132 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 NR2C2APQ86WQ0 139 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 TMEM256Q8N2U0 113 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 FGFRL1Q8N441 504 aa4.17□□□□□ -1.74
PTPN13-209ENST00000511467 OR1N2Q8NGR9 330 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms