RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 NUPL2O15504 423 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 NDUFS6O75380 124 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 SUPT3HO75486 399 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 SC5DO75845 299 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 KLHL2O95198 593 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 RAB3DO95716 219 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 FAM228BP0C875 321 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 NQO1P15559 274 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 TAC1P20366 129 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 F2RP25116 425 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 HTR1DP28221 377 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 CD40LGP29965 261 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 MAS1LP35410 378 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 RANBP1P43487 201 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 MNAT1P51948 309 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF121P58317 390 aaPredicted RBP2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 HERVK_113P61574 105 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ESRRGP62508 458 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 RPL31P62899 125 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ELF3P78545 371 aaPredicted RBP2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 BASP1P80723 227 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 OR8G1Q15617 311 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF141Q15928 474 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ZBED5Q49AG3 693 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 C5orf47Q569G3 176 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 TTC32Q5I0X7 151 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF691Q5VV52 312 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 FAHD1Q6P587 224 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 PLEKHG7Q6ZR37 379 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 MBOAT2Q6ZWT7 520 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 LINC01551Q86U37 167 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 C10orf111Q8N326 155 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 MREGQ8N565 214 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 CYB561A3Q8NBI2 242 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 OR10Z1Q8NGY1 313 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 OR4S2Q8NH73 311 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 APH1BQ8WW43 257 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ITFG2Q969R8 447 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 TMEM230Q96A57 120 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 FAM210AQ96ND0 272 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 MICU1Q9BPX6 476 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 COPS4Q9BT78 406 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 DERL2Q9GZP9 239 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 SRRQ9GZT4 340 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 TOLLIPQ9H0E2 274 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 C19orf12Q9NSK7 152 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 GLTPQ9NZD2 209 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 CLEC2DQ9UHP7 191 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF391Q9UJN7 358 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 NDUFAF1Q9Y375 327 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 URGCP-MRPS24S4R325 110 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 IGLV4-69A0A075B6H9 119 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 PLAC8L1A1L4L8 177 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 GGT3PA6NGU5 568 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 F6UB75 175 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 FAAHO00519 579 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 NME4O00746 187 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 PLPP3O14495 311 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 DEFB4AO15263 64 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 RBP4P02753 201 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 HMGN2P05204 90 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 NEFHP12036 1026 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF823P16415 610 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 CCL3L1P16619 93 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 PGAM1P18669 254 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 RAB3BP20337 219 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 CEACAM3P40198 252 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 CXCL5P42830 114 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 MARCKSL1P49006 195 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 NUTF2P61970 127 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 MRPS15P82914 257 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 PSG4Q00888 419 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 ST3GAL4Q11206 333 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 BNIP2Q12982 314 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 MADCAM1Q13477 382 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 EBI3Q14213 229 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF726P1Q15940 193 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 TAL2Q16559 108 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 SMARCD3Q6STE5 483 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 FBXW12Q6X9E4 464 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 TEX43Q6ZNM6 134 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 SSX7Q7RTT5 188 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 CBR4Q8N4T8 237 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 OR5L1Q8NGL2 311 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 CDC26Q8NHZ8 85 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 ACTRT1Q8TDG2 376 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 C16orf78Q8WTQ4 265 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 LRRC29Q8WV35 223 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 KCTD7Q96MP8 289 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 GAFA1Q96PS6 74 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 ADAT1Q9BUB4 502 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 OR2H1Q9GZK4 316 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 SLC22A4Q9H015 551 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 SAV1Q9H4B6 383 aaPredicted RBP2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 WDR55Q9H6Y2 383 aaPredicted RBP2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 SLCO1B3Q9NPD5 702 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 TAS2R7Q9NYW3 318 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 HHLA2Q9UM44 414 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 SIGLEC7Q9Y286 467 aa2.12□□□□□ -2.07
TOPBP1-208ENST00000511439 RNF11Q9Y3C5 154 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms