RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 REG4Q9BYZ8 158 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
SCLT1-209ENST00000511426 C7orf69Q9H7B7 122 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 NUDT19A8MXV4 375 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 ATP6V1G1O75348 118 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 ATP6V0CP27449 155 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 SERF2P84101 59 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 CENPVQ7Z7K6 275 aaPredicted RBP12.18□□□□□ -0.46
SCLT1-209ENST00000511426 HSD17B11Q8NBQ5 300 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 ZNF114Q8NC26 417 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 AJUBAQ96IF1 538 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 RITA1Q96K30 269 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 PFDN2Q9UHV9 154 aa12.18□□□□□ -0.46
SCLT1-209ENST00000511426 TRAV40A0A0B4J280 105 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 FBXO24O75426 580 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 IFNA4P05014 189 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 FAM157CP0CG43 387 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 HES1Q14469 280 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 PLGLAQ15195 96 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 AANATQ16613 207 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 MRGPRG-AS1Q2M3A8 158 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 FAM74A1Q5RGS3 127 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 RNASEH2CQ8TDP1 164 aaKnown RBP12.17□□□□□ -0.46
SCLT1-209ENST00000511426 MEGF9Q9H1U4 602 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 DCHS2Q6V1P9 2916 aa12.17□□□□□ -0.46
SCLT1-209ENST00000511426 A0A1W2PRD5 423 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 A0A1W2PRF3 423 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 A0A1W2PRM7 423 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 S100A1P23297 94 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 TNXAQ16473 311 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 C5orf64Q2M2E5 130 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 OR2G3Q8NGZ4 309 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 CACNG8Q8WXS5 425 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCLT1-209ENST00000511426 PARP11Q9NR21 331 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 CORTO00230 105 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 CA2P00918 260 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
SCLT1-209ENST00000511426 TMEM11P17152 192 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 MDKP21741 143 aaPredicted RBP12.16□□□□□ -0.46
SCLT1-209ENST00000511426 DYNAPQ8N1N2 210 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 TEX29Q8N6K0 151 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 FBXL15Q9H469 300 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 TPSG1Q9NRR2 321 aa12.16□□□□□ -0.46
SCLT1-209ENST00000511426 AKAP6Q13023 2319 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 UBE2L5PA0A1B0GUS4 154 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 CGB1A6NKQ9 187 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 ZNF705EA8MWA4 302 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-209ENST00000511426 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 CNTFRP26992 372 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 PVRIGQ6DKI7 326 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 OR1L6Q8NGR2 347 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 TMEM170AQ8WVE7 144 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 NPVFQ9HCQ7 196 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 FBXO7Q9Y3I1 522 aa12.15□□□□□ -0.46
SCLT1-209ENST00000511426 USP9YO00507 2555 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-209ENST00000511426 IGLC7A0M8Q6 106 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 MBP02144 154 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 FBP1P09467 338 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 MYOD1P15172 320 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 GPX4P36969 197 aaPredicted RBP12.14□□□□□ -0.47
SCLT1-209ENST00000511426 TMEM249Q2WGJ8 235 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 ZNF562Q6V9R5 426 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 KRTAP1-3Q8IUG1 177 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 EIF4E3Q8N5X7 224 aaKnown RBP12.14□□□□□ -0.47
SCLT1-209ENST00000511426 SRSF12Q8WXF0 261 aaKnown RBP12.14□□□□□ -0.47
SCLT1-209ENST00000511426 Q96MF0 132 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 FOXC2Q99958 501 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 ARHGAP32A7KAX9 2087 aa12.14□□□□□ -0.47
SCLT1-209ENST00000511426 OPN1MWP04001 364 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 OPN1MW2P0DN77 364 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 OPN1MW3P0DN78 364 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 IGHV4-31P0DP07 118 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 WT1-ASQ06250 92 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 PJVKQ0ZLH3 352 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 SLC7A5P1Q8MH63 180 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 ZNF709Q8N972 641 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 SH3BGRL3Q9H299 93 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 HLA-DRB1P01911 266 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 OR13C7P0DN81 318 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 RAB31Q13636 194 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 TUSC1Q2TAM9 212 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 C10orf55Q5SWW7 151 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 ETFRF1Q6IPR1 90 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 IL34Q6ZMJ4 242 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 COMMD1Q8N668 190 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 OR10W1Q8NGF6 305 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 OR1P1Q8NH06 330 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 LYPD6BQ8NI32 183 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 C17orf50Q8WW18 174 aa12.13□□□□□ -0.47
SCLT1-209ENST00000511426 FAM96BQ9Y3D0 163 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms