RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 GGTLC1Q9BX51 225 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 TMEM242Q9NWH2 141 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 ARL2-SNX15V9GYD0 113 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 PIEZO2Q9H5I5 2752 aa7.51□□□□□ -1.21
HTT-205ENST00000509043 SRRM4A7MD48 611 aaKnown RBP7.5□□□□□ -1.21
HTT-205ENST00000509043 BUB1B-PAK6H3BSN5 160 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 DLL1O00548 723 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 PDE6DO43924 150 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 SNRNP70P08621 437 aaKnown RBP7.5□□□□□ -1.21
HTT-205ENST00000509043 CEACAM3P40198 252 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 COMPP49747 757 aaPredicted RBP7.5□□□□□ -1.21
HTT-205ENST00000509043 RHOBP62745 196 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 HNF4GQ14541 408 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 AVPI1Q5T686 147 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 MMD2Q8IY49 270 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 KIR3DL3Q8N743 410 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 TMEM170AQ8WVE7 144 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 SRSF8Q9BRL6 282 aaKnown RBP7.5□□□□□ -1.21
HTT-205ENST00000509043 PATZ1Q9HBE1 687 aaKnown RBP7.5□□□□□ -1.21
HTT-205ENST00000509043 MLXQ9UH92 298 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 PUS1Q9Y606 427 aaKnown RBP eCLIP7.5□□□□□ -1.21
HTT-205ENST00000509043 PXMP4Q9Y6I8 212 aa7.5□□□□□ -1.21
HTT-205ENST00000509043 SPENQ96T58 3664 aaKnown RBP7.5□□□□□ -1.21
HTT-205ENST00000509043 COLCA2A8K830 154 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 F6UZH7 168 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 CXorf1O96002 111 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 IGLV2-23P01705 113 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 RNASE2P10153 161 aaKnown RBP7.49□□□□□ -1.21
HTT-205ENST00000509043 B2MP61769 119 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 LY6DQ14210 128 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 CDSNQ15517 529 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 FAM90A2PQ658T7 463 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 ETFRF1Q6IPR1 90 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 SSX7Q7RTT5 188 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 OR11H6Q8NGC7 330 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 MALSU1Q96EH3 234 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 RNF2Q99496 336 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 MGST2Q99735 147 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 HINT2Q9BX68 163 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 CTDSP1Q9GZU7 261 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 SLC25A22Q9H936 323 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 NAT8Q9UHE5 227 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 INSIG2Q9Y5U4 225 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 DMXL2Q8TDJ6 3036 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 SPTBN2O15020 2390 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 BOD1L1Q8NFC6 3051 aa7.49□□□□□ -1.21
HTT-205ENST00000509043 OOSP1A8MZH6 123 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 CORTO00230 105 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 TGOLN2O43493 480 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 CLN5O75503 358 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 VENTXO95231 258 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 FBP1P09467 338 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 STAG3L2P0CL84 134 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 STAG3L3P0CL85 134 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 FGF8P55075 233 aaPredicted RBP7.48□□□□□ -1.21
HTT-205ENST00000509043 RAB5BP61020 215 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 PRR20EP86478 221 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 PRR20CP86479 221 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 PRR20DP86480 221 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 PRR20BP86481 221 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 PRR20AP86496 221 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 PAX2Q02962 417 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 CD69Q07108 199 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 ARSJQ5FYB0 599 aaPredicted RBP7.48□□□□□ -1.21
HTT-205ENST00000509043 CYP2G1PQ6ZSU1 146 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 ZNF114Q8NC26 417 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 ITLN2Q8WWU7 325 aaPredicted RBP7.48□□□□□ -1.21
HTT-205ENST00000509043 RPEQ96AT9 228 aa7.48□□□□□ -1.21
HTT-205ENST00000509043 ARFGEF3Q5TH69 2177 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 ANKHD1Q8IWZ3 2542 aaKnown RBP7.47□□□□□ -1.21
HTT-205ENST00000509043 BSNQ9UPA5 3926 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 LOC105371242A0A075B767 164 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 IGHV1-3A0A0C4DH29 117 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 A6NNC1 897 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 LY6LH3BQJ8 138 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 ACTL6BO94805 426 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 YIF1AO95070 293 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 OR2C1O95371 312 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 SOD3P08294 240 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 PRTN3P24158 256 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 HTR1DP28221 377 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 REG1BP48304 166 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 EFNA4P52798 201 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 TAS2R45P59539 299 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 CD81P60033 236 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 SELENOTP62341 195 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 PRSS8Q16651 343 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 TMEM241Q24JQ0 296 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 PVRIGQ6DKI7 326 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 STPG3Q8N7X2 389 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 OR4P4Q8NGL7 312 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 HIST1H2BAQ96A08 127 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 SSX3Q99909 188 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
HTT-205ENST00000509043 ZNF430Q9H8G1 570 aaPredicted RBP7.47□□□□□ -1.21
HTT-205ENST00000509043 SDF2L1Q9HCN8 221 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 ZNRD1Q9P1U0 126 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 SLC45A2Q9UMX9 530 aa7.47□□□□□ -1.21
HTT-205ENST00000509043 HCFC1P51610 2035 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms