RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GPR183P32249 361 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 GPR141Q7Z602 305 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 ZMAT4Q9H898 229 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 SIGLEC8Q9NYZ4 499 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 KLK11Q9UBX7 282 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 IGHV3-21A0A0B4J1V1 117 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 C2orf70A6NJV1 201 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 SNAPC5O75971 98 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 CLEC3BP05452 202 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 FOLR2P14207 255 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 PGAM2P15259 253 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 PI3P19957 117 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 S100GP29377 79 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 WT1-ASQ06250 92 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 GUCA2BQ16661 112 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 FAM209BQ5JX69 171 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 LPCAT3Q6P1A2 487 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 OR1L8Q8NGR8 309 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 OR52I2Q8NH67 350 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 PLEKHA3Q9HB20 300 aa11.21□□□□□ -0.61
UBE2D3-228ENST00000508974 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 DBX1A6NMT0 343 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 RGS5O15539 181 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 CD3DP04234 171 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 IFNA6P05013 189 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 SERPINE2P07093 398 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 PPP5CP53041 499 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 CD81P60033 236 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 SPCS2Q15005 226 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 RNASE10Q5GAN6 216 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 SLC25A24Q6NUK1 477 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 CLVS1Q8IUQ0 354 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 SLC38A6Q8IZM9 456 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 GDPD1Q8N9F7 314 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 CXorf58Q96LI9 332 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 THAP7Q9BT49 309 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 TUBA4BQ9H853 241 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 C19orf73Q9NVV2 129 aa11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 KMT2CQ8NEZ4 4911 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-228ENST00000508974 LGALS9O00182 355 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 ALDH3B2P48448 385 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 DEFB114Q30KQ6 69 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 FAM106AQ4KMX7 169 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 LAX1Q8IWV1 398 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 LSM10Q969L4 123 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 MRGPRFQ96AM1 343 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 ABHD1Q96SE0 405 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 WFDC10AQ9H1F0 79 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 MIXL1Q9H2W2 232 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 THYN1Q9P016 225 aa11.19□□□□□ -0.62
UBE2D3-228ENST00000508974 TMEM213A2RRL7 107 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 CYB5BO43169 146 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 IGKV1-39P01597 117 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 IGKV1D-39P04432 117 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 CD7P09564 240 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 CBLN1P23435 193 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 MFAP2P55001 183 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 TM4SF20Q53R12 229 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 THOC7Q6I9Y2 204 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 PLET1Q6UQ28 207 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 UNQ9165/PRO28630Q6UXU0 137 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 UBAC2Q8NBM4 344 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 OR4D10Q8NGI6 311 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 OR2K2Q8NGT1 345 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 NEURL2Q9BR09 285 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 PRNDQ9UKY0 176 aa11.18□□□□□ -0.62
UBE2D3-228ENST00000508974 C15orf61A6NNL5 157 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 ZNF785A8K8V0 405 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 CTDSP2O14595 271 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 FGF2P09038 288 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 PTBP1P26599 531 aaKnown RBP eCLIP11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 UCP3P55916 312 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 IZUMO4Q1ZYL8 232 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 SCGB2B2Q4G0G5 96 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 SPINK9Q5DT21 86 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 FAAP20Q6NZ36 180 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 BTNL8Q6UX41 500 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 H2BFWTQ7Z2G1 175 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 UXS1Q8NBZ7 420 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 OR4A16Q8NH70 328 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 SEC22AQ96IW7 307 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 TM2D3Q9BRN9 247 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 TMEM14BQ9NUH8 114 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 SLC2A8Q9NY64 477 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 MTFP1Q9UDX5 166 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 MLXQ9UH92 298 aa11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-228ENST00000508974 A8MZ25 164 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms