RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 ZFP57Q9NU63 452 aa6.7□□□□□ -1.34
SNCA-211ENST00000508895 TMEM14BQ9NUH8 114 aa6.7□□□□□ -1.34
SNCA-211ENST00000508895 FOXA2Q9Y261 457 aaPredicted RBP6.7□□□□□ -1.34
SNCA-211ENST00000508895 NSG2Q9Y328 171 aa6.7□□□□□ -1.34
SNCA-211ENST00000508895 IGLC7A0M8Q6 106 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 HMX3A6NHT5 357 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 MSGN1A6NI15 193 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 ACTL6BO94805 426 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 ELANEP08246 267 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 AREGP15514 252 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 MYCNOSP40205 109 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 CDX1P47902 265 aaPredicted RBP6.69□□□□□ -1.34
SNCA-211ENST00000508895 RAB9AP51151 201 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 UBE2MP61081 183 aaKnown RBP6.69□□□□□ -1.34
SNCA-211ENST00000508895 EGFEM1PQ0D2K5 195 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 FHL3Q13643 280 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 ANKRD55Q3KP44 614 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 TMEM128Q5BJH2 165 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 CXorf66Q5JRM2 361 aaPredicted RBP6.69□□□□□ -1.34
SNCA-211ENST00000508895 TMEM268Q5VZI3 342 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 SLC25A42Q86VD7 318 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 SELENOHQ8IZQ5 122 aaKnown RBP6.69□□□□□ -1.34
SNCA-211ENST00000508895 COMMD1Q8N668 190 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 SLC35G3Q8N808 338 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 OR5M8Q8NGP6 311 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 TMEM56Q96MV1 263 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 MS4A10Q96PG2 267 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 PHB2Q99623 299 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 NUDT15Q9NV35 164 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 TMEM56-RWDD3S4R434 201 aa6.69□□□□□ -1.34
SNCA-211ENST00000508895 TRAV6A0A075B6T7 132 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 IGHV4OR15-8A0A075B7B6 117 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 A0A087WW49 117 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 SFT2D2O95562 160 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 IGHV3-11P01762 117 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 HLA-AP01891 365 aaKnown RBP6.68□□□□□ -1.34
SNCA-211ENST00000508895 TCRBP04435 133 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 ANXA7P20073 488 aaKnown RBP6.68□□□□□ -1.34
SNCA-211ENST00000508895 VAMP1P23763 118 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 SLURP1P55000 103 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 RAB25P57735 213 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 TMEM267Q0VDI3 215 aaPredicted RBP6.68□□□□□ -1.34
SNCA-211ENST00000508895 DHRS2Q13268 280 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 NMSQ5H8A3 153 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 Q6ZRM9 215 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 H2BFWTQ7Z2G1 175 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 OR5T1Q8NG75 326 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 OR10W1Q8NGF6 305 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 MRAPQ8TCY5 172 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 C4orf3Q8WVX3 66 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 IL22RA2Q969J5 263 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
SNCA-211ENST00000508895 FYTTD1Q96QD9 318 aaKnown RBP6.68□□□□□ -1.34
SNCA-211ENST00000508895 TSC22D3Q99576 134 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 SPIN2AQ99865 258 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 SPIN2BQ9BPZ2 258 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 QTRT1Q9BXR0 403 aaKnown RBP6.68□□□□□ -1.34
SNCA-211ENST00000508895 COMMD5Q9GZQ3 224 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 PRNDQ9UKY0 176 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 OR51B2Q9Y5P1 312 aa6.68□□□□□ -1.34
SNCA-211ENST00000508895 A0A0B4J293 547 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 A0A0B4J2A0 478 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 TEX50A0A1B0GTY4 177 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 C9orf170A2RU37 121 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 NPIPB5A8MRT5 1133 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 H3BUA1 57 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 REG1AP05451 166 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 OR4E1P0C645 316 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 ANXA3P12429 323 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 TPPP2P59282 170 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 SRPXP78539 464 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 WT1-ASQ06250 92 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 AARDQ4LEZ3 155 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 THOC7Q6I9Y2 204 aaKnown RBP6.67□□□□□ -1.34
SNCA-211ENST00000508895 LYZL2Q7Z4W2 148 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 NRARPQ7Z6K4 114 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 HAPLN4Q86UW8 402 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 ZNF429Q86V71 674 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 FAM219AQ8IW50 185 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 LGI3Q8N145 548 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 LRTM2Q8N967 370 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 OR11H1Q8NG94 326 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 OR52B4Q8NGK2 314 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 OR1L8Q8NGR8 309 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 OR5B3Q8NH48 314 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 RNASE11Q8TAA1 199 aaKnown RBP6.67□□□□□ -1.34
SNCA-211ENST00000508895 DCUN1D4Q92564 292 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 LSM10Q969L4 123 aaKnown RBP6.67□□□□□ -1.34
SNCA-211ENST00000508895 GPR146Q96CH1 333 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 TMEM68Q96MH6 324 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 NDUFA4L2Q9NRX3 87 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 COA4Q9NYJ1 87 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 CACNG5Q9UF02 275 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 SHPKQ9UHJ6 478 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 ZNF257Q9Y2Q1 563 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 DMRT1Q9Y5R6 373 aa6.67□□□□□ -1.34
SNCA-211ENST00000508895 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
SNCA-211ENST00000508895 FAM240BA0A1B0GVZ2 78 aa6.66□□□□□ -1.34
SNCA-211ENST00000508895 DUXBA0A1W2PPF3 345 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms