RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 HERVK_113P63121 156 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 ADIRFQ15847 76 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 ATRAIDQ6UW56 229 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM61Q8N0U2 210 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 SSBP3Q9BWW4 388 aaPredicted RBP3.21□□□□□ -1.89
NEDD4-209ENST00000508871 LHX9Q9NQ69 397 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 ASF1BQ9NVP2 202 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 Q9UF83 564 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 HIGD1AQ9Y241 93 aa3.21□□□□□ -1.89
NEDD4-209ENST00000508871 DSPPQ9NZW4 1301 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00862A6NCI5 91 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 A6NDN8 102 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 OVOL3O00110 214 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 CDX4O14627 284 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 PGA4P0DJD7 388 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 PGA3P0DJD8 388 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SRIP30626 198 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ENDOGQ14249 297 aaKnown RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 CLLU1Q5K131 121 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 EBLN2Q6P2I7 272 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 LCN15Q6UWW0 184 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ACBD7Q8N6N7 88 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 OR10G8Q8NGN5 311 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 FAM213BQ8TBF2 198 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 S100ZQ8WXG8 99 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 PDXPQ96GD0 296 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF681Q96N22 645 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 YPEL2Q96QA6 119 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SHARPINQ9H0F6 387 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 FGF22Q9HCT0 170 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 RBFOX1Q9NWB1 397 aaKnown RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 EPDR1Q9UM22 224 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 TIMM9Q9Y5J7 89 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 NCBP2LA6PVI3 153 aaKnown RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SOCS2O14508 198 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 MGST3O14880 152 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SLC25A5P05141 298 aaKnown RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 PRSS3P35030 304 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 HMGA2P52926 109 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 STAC2Q6ZMT1 411 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00305Q7Z4B0 112 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SIGLECL1Q8N7X8 197 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ORAOV1Q8WV07 137 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 HYLS1Q96M11 299 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 PLEKHF2Q9H8W4 249 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 COL27A1Q8IZC6 1860 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 IGLV5-37A0A075B6J1 123 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 TRAV9-2A0A087WT02 112 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 CPSF4O95639 269 aaKnown RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 IGF2P01344 180 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 RPS4Y1P22090 263 aaKnown RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF121P58317 390 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF585BQ52M93 769 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 KDM4DQ6B0I6 523 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF787Q6DD87 383 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 RBMXL3Q8N7X1 1067 aaKnown RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 ZNRF2Q8NHG8 242 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SPIN2AQ99865 258 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 SPIN2BQ9BPZ2 258 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 C6orf106Q9H6K1 298 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-209ENST00000508871 FKBP11Q9NYL4 201 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 TAS2R8Q9NYW2 309 aa3.21□□□□□ -1.9
NEDD4-209ENST00000508871 PLAC8L1A1L4L8 177 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 OR5H1A6NKK0 313 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ZFP92A6NM28 416 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 UPK1AO00322 258 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CLDN15P56746 228 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 MEIG1Q5JSS6 88 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 NCMAPQ5T1S8 102 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF626Q68DY1 528 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 Q6ZS46 218 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 FAM210BQ96KR6 192 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 IMUPQ9GZP8 106 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 DUSP21Q9H596 190 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF257Q9Y2Q1 563 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 A0A087WXM4 84 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 TLCD2A6NGC4 264 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 INAFM1C9JVW0 142 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 M0R129 80 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SPRY3O43610 288 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SEC11BP0C7V7 166 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF688P0C7X2 276 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 IL7P13232 177 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 TDGF1P13385 188 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CTSEP14091 401 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 GPX4P36969 197 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SSR2P43308 183 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CRISP3P54108 245 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 OCIAD2Q56VL3 154 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 FHL5Q5TD97 284 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SLC7A6Q92536 515 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 RITA1Q96K30 269 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 MIEN1Q9BRT3 115 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 AGMATQ9BSE5 352 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SELENOIQ9C0D9 397 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 PRO1933Q9H354 126 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 GLIPR2Q9H4G4 154 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 PGPA6NDG6 321 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms