RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ZNF106Q9H2Y7 1883 aaKnown RBP3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 MYO5BQ9ULV0 1848 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 ARHGAP31Q2M1Z3 1444 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 FOCADQ5VW36 1801 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 KIF13BQ9NQT8 1826 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 TRAV9-1A0A075B6T8 112 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 IZUMO1RA6ND01 250 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 IGLL5B9A064 214 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 CCL25O15444 150 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 PLA2G10O15496 165 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF73O43830 326 aaPredicted RBP3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 SERF1AO75920 110 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 IFNA17P01571 189 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 DIO3P55073 304 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 EIF3IQ13347 325 aaKnown RBP3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF141Q15928 474 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 RTL8BQ17RB0 113 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 TMEM183BQ1AE95 376 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 VMA21Q3ZAQ7 101 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 LDLRAD2Q5SZI1 272 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 NCMAPQ5T1S8 102 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 GUSBP11Q6P575 273 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 TMEM183AQ8IXX5 376 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF440Q8IYI8 595 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 OR51A4Q8NGJ6 313 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 OR5H2Q8NGV7 314 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 DCANP1Q8TF63 244 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 SFT2D1Q8WV19 159 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 RNASE6Q93091 150 aaKnown RBP3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF799Q96GE5 643 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 TEX37Q96LM6 180 aa3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 NAA38Q9BRA0 125 aaKnown RBP3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 PSMG3Q9BT73 122 aaPredicted RBP3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF471Q9BX82 626 aaPredicted RBP3.03□□□□□ -1.92
SMARCA5-202ENST00000508573 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.93
SMARCA5-202ENST00000508573 ABCC10Q5T3U5 1492 aa3.03□□□□□ -1.93
SMARCA5-202ENST00000508573 BAZ1BQ9UIG0 1483 aaKnown RBP3.03□□□□□ -1.93
SMARCA5-202ENST00000508573 NPFFO15130 113 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 IGKV1-5P01602 117 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 TRGC2P03986 189 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 LINC00869P0C866 280 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 IGLC6P0CF74 106 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 ZNF80P51504 273 aaPredicted RBP3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 CRISP3P54108 245 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 CMC4P56277 68 aaPredicted RBP3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 RBM11P57052 281 aaKnown RBP3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 TAS2R20P59543 309 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 FGF12P61328 243 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 COPZ1P61923 177 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 ZNF876PQ49A33 203 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 AMMECR1LQ6DCA0 310 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 TMEM14EPQ6UXP3 125 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 LCA10Q71F78 164 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 ZNF695Q8IW36 515 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 RPP25LQ8N5L8 163 aaKnown RBP3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 PACRGLQ8N7B6 248 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 TCTEX1D1Q8N7M0 179 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 ZNF709Q8N972 641 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 OR4A5Q8NH83 315 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 MGLLQ99685 303 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 NKX6-2Q9C056 277 aaPredicted RBP3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 C8orf17Q9NRJ1 99 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 SCN3BQ9NY72 215 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 NAT8Q9UHE5 227 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 GON4LQ3T8J9 2241 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 DOCK6Q96HP0 2047 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 SPATA31E1Q6ZUB1 1445 aa3.02□□□□□ -1.93
SMARCA5-202ENST00000508573 CEP170Q5SW79 1584 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 IGLV7-46A0A075B6I9 117 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 IGKV3D-15A0A087WSY6 115 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 LINC00862A6NCI5 91 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 ARRDC5A6NEK1 342 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 TLCD2A6NGC4 264 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 M0R143 59 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 RBFOX2O43251 390 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 ZNF728P0DKX0 622 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 CRISP2P16562 243 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 CXCL5P42830 114 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 EIF2B2P49770 351 aaKnown RBP3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 ZNF136P52737 540 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 BSPH1Q075Z2 132 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 TMEM244Q5VVB8 128 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 C1orf140Q5VVS0 124 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 MORN3Q6PF18 240 aaPredicted RBP3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 SLC25A34Q6PIV7 304 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 CROCCP2Q86T23 111 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 C8orf59Q8N0T1 100 aaPredicted RBP3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 ACBD7Q8N6N7 88 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 Q8N7P7 452 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 C20orf203Q8NBC4 194 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 OR11G2Q8NGC1 345 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 OR5C1Q8NGR4 320 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 TERB2Q8NHR7 220 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 C15orf40Q8WUR7 153 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 H1FXQ92522 213 aaKnown RBP3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 CMBLQ96DG6 245 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 C2orf50Q96LR7 162 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 AP1S3Q96PC3 154 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 PYGO2Q9BRQ0 406 aa3.01□□□□□ -1.93
SMARCA5-202ENST00000508573 SMAD5-AS1Q9Y6J3 95 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms