RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LEMD1Q68G75 181 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 HCP5Q6MZN7 132 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 LYPD4Q6UWN0 246 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 DHRS11Q6UWP2 260 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C1QL2Q7Z5L3 287 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF485Q8NCK3 441 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 OR5A1Q8NGJ0 315 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 CLDND2Q8NHS1 167 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF696Q9H7X3 374 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 CACNG5Q9UF02 275 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ACANP16112 2415 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TRAV9-2A0A087WT02 112 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C9JCJ5 164 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 CLDN34H7C241 214 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 IGKV1D-33P01593 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 IGKV1-33P01594 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 FCGR2BP31994 310 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 EVX1P49640 407 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF56Q15929 161 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 FAM78BQ5VT40 261 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C10orf113Q5VZT2 155 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 CLEC18BQ6UXF7 455 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C1QL4Q86Z23 238 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 GCSAMQ8N6F7 178 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 OR5AU1Q8NGC0 362 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 PARP12Q9H0J9 701 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 BET1LQ9NYM9 111 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 KIAA1549Q9HCM3 1950 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 A0A1W2PPE3 182 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 H0Y980 276 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TAAR5O14804 337 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV1-46P01743 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 IGHA1P01876 353 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 RPL35P42766 123 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 HIST1H1AQ02539 215 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 MGAT2Q10469 447 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 LINC00596Q86U02 117 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM219Q86XT9 240 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 BPIFA4PQ86YQ2 179 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 SYS1Q8N2H4 156 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZDHHC22Q8N966 263 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 MRPL30Q8TCC3 161 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 SMIM19Q96E16 107 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 MMP28Q9H239 520 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 NXT2Q9NPJ8 142 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TSSC4Q9Y5U2 329 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TMSB15BA0A087X1C1 80 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 AP4M1O00189 453 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 MFNGO00587 321 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 P01737 135 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 GABRB1P18505 474 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 S100A11P31949 105 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 RPL8P62917 257 aaKnown RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 TNP2Q05952 138 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 SLC38A11Q08AI6 406 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 SNAI3Q3KNW1 292 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 PAPPA-AS1Q5QFB9 102 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 SHISA2Q6UWI4 295 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 CD300LDQ6UXZ3 194 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF705AQ6ZN79 300 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF826PQ6ZT77 177 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C10orf111Q8N326 155 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 C10orf35Q96D05 121 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 AKIP1Q9NQ31 210 aa2.48□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV2-70DA0A0C4DH43 119 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 CLPSP04118 112 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 PTGDSP41222 190 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 NMUP48645 174 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ATP6V1FQ16864 119 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SP6Q3SY56 376 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF841Q6ZN19 808 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 GTF2H5Q6ZYL4 71 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 WIPF2Q8TF74 440 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 RNF166Q96A37 237 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 MBD6Q96DN6 1003 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF107Q9UII5 783 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 STARD10Q9Y365 291 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 POLQO75417 2590 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 A0A1B0GUS0 222 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM218A2RU14 115 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SHISA9B4DS77 424 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 H3BS24 57 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SLC25A20O43772 301 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV3-11P01762 117 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 PMCHP20382 165 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SELENOTP62341 195 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SVBPQ8N300 66 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ARRDC1Q8N5I2 433 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SRD5A3Q9H8P0 318 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TOMM7Q9P0U1 55 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 FAM215AQ9Y5M1 114 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 MED12LQ86YW9 2145 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 C9orf170A2RU37 121 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 C17orf51A8MQB3 221 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 CEACAM18A8MTB9 384 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 PRR32B1ATL7 298 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 DNAL4O96015 105 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 IGHG2P01859 326 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 COX6CP09669 75 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 C8orf88P0DMB2 117 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms