RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 WDR89Q96FK6 387 aaPredicted RBP10.77□□□□□ -0.69
RAB28-205ENST00000508274 CSMD3Q7Z407 3707 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 TRBV7-1A0A0A6YYK4 115 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 TEX50A0A1B0GTY4 177 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 CLEC3BP05452 202 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 FGF2P09038 288 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 TSPAN5P62079 268 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 GUCA2BQ16661 112 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 UNQ9165/PRO28630Q6UXU0 137 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 ZNF502Q8TBZ5 544 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 CXorf58Q96LI9 332 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 CMTM3Q96MX0 182 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 CITED4Q96RK1 184 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 NEURL2Q9BR09 285 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 SRSF8Q9BRL6 282 aaKnown RBP10.76□□□□□ -0.69
RAB28-205ENST00000508274 HINT2Q9BX68 163 aa10.76□□□□□ -0.69
RAB28-205ENST00000508274 SMIM31A0A1B0GVY4 71 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 DBX1A6NMT0 343 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 A8MWP6 167 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 TRAPPC2P0DI81 140 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 TRAPPC2BP0DI82 140 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 OR13C7P0DN81 318 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 CBLN1P23435 193 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 MFAP2P55001 183 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 CTF1Q16619 201 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 TMEM61Q8N0U2 210 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 DEFB125Q8N687 156 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 GDPD1Q8N9F7 314 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 OR1L8Q8NGR8 309 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 SCPEP1Q9HB40 452 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 RETNQ9HD89 108 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 NDUFA4L2Q9NRX3 87 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 MLXQ9UH92 298 aa10.75□□□□□ -0.69
RAB28-205ENST00000508274 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 M0QYG6 137 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 TPPPO94811 219 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 GABARAPO95166 117 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 SERPINE2P07093 398 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 RCVRNP35243 200 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 RORCP51449 518 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 FAM106AQ4KMX7 169 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 TM4SF20Q53R12 229 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 TBC1D26Q86UD7 250 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 LAX1Q8IWV1 398 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 EDA2RQ9HAV5 297 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 TECRQ9NZ01 308 aaKnown RBP10.74□□□□□ -0.69
RAB28-205ENST00000508274 OR51B2Q9Y5P1 312 aa10.74□□□□□ -0.69
RAB28-205ENST00000508274 FAM25AB3EWG3 89 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 FAM25CB3EWG5 89 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 FAM25GB3EWG6 89 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.691e-6■■■■■ 34.9
RAB28-205ENST00000508274 GPR107Q5VW38 600 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 THOC7Q6I9Y2 204 aaKnown RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 SLC25A24Q6NUK1 477 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 BTNL8Q6UX41 500 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 LINC00322Q6ZN03 302 aaPredicted RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 UXS1Q8NBZ7 420 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 LSM10Q969L4 123 aaKnown RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 SLC2A8Q9NY64 477 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 THYN1Q9P016 225 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 KLK11Q9UBX7 282 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 CEPT1Q9Y6K0 416 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 SACSQ9NZJ4 4579 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 TENM2Q9NT68 2774 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 RBMY1BA6NDE4 496 aaKnown RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 RBMY1EA6NEQ0 496 aaKnown RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 OR2T8A6NH00 312 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 TGOLN2O43493 480 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 SNAPC5O75971 98 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 IGKV1-39P01597 117 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 IGKV1D-39P04432 117 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 RBMY1DP0C7P1 496 aaKnown RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 ZNF57Q68EA5 555 aaPredicted RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 ZFAND6Q6FIF0 208 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 PLET1Q6UQ28 207 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 SRD5A3Q9H8P0 318 aa10.73□□□□□ -0.69
RAB28-205ENST00000508274 F11RQ9Y624 299 aaKnown RBP10.73□□□□□ -0.69
RAB28-205ENST00000508274 DYNC2H1Q8NCM8 4307 aaKnown RBP10.72□□□□□ -0.69
RAB28-205ENST00000508274 C15orf61A6NNL5 157 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 SCAF4O95104 1147 aaKnown RBP10.72□□□□□ -0.69
RAB28-205ENST00000508274 LYL1P12980 280 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 LPCAT3Q6P1A2 487 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 HSD17B13Q7Z5P4 300 aaPredicted RBP10.72□□□□□ -0.69
RAB28-205ENST00000508274 OR52I2Q8NH67 350 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 VN1R17PQ8TDU5 208 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 SEC22AQ96IW7 307 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 FAM110AQ9BQ89 295 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 TMEM14BQ9NUH8 114 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 GAR1Q9NY12 217 aaKnown RBP10.72□□□□□ -0.69
RAB28-205ENST00000508274 EXTL2Q9UBQ6 330 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 PRNDQ9UKY0 176 aa10.72□□□□□ -0.69
RAB28-205ENST00000508274 RYR2Q92736 4967 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 F8W735 103 aaPredicted RBP10.71□□□□□ -0.69
RAB28-205ENST00000508274 ZNF182P17025 639 aaPredicted RBP10.71□□□□□ -0.69
RAB28-205ENST00000508274 PI3P19957 117 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 UCP3P55916 312 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 MZT2AQ6P582 158 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 SLC38A6Q8IZM9 456 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms