RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 FAM209BQ5JX69 171 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 GTSCR1Q86UQ5 136 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 SNX29P2Q8IUI4 249 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 TMEM61Q8N0U2 210 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 DEFB125Q8N687 156 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 DGCR14Q96DF8 476 aaKnown RBP12.09□□□□□ -0.47
HOXC4-203ENST00000507650 NEURL2Q9BR09 285 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 QTRT1Q9BXR0 403 aaKnown RBP12.09□□□□□ -0.47
HOXC4-203ENST00000507650 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
HOXC4-203ENST00000507650 IGHV3-35A0A0C4DH35 117 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 GPR31O00270 319 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 KRASP01116 189 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 CLEC3BP05452 202 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 HIST1H1BP16401 226 aaKnown RBP12.08□□□□□ -0.48
HOXC4-203ENST00000507650 GPR183P32249 361 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 TM4SF20Q53R12 229 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 LAX1Q8IWV1 398 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 GDPD1Q8N9F7 314 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 CD300LFQ8TDQ1 290 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 DYNLRB2Q8TF09 96 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 SRSF8Q9BRL6 282 aaKnown RBP12.08□□□□□ -0.48
HOXC4-203ENST00000507650 AIFM2Q9BRQ8 373 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 COMMD5Q9GZQ3 224 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 VCX3AQ9NNX9 186 aa12.08□□□□□ -0.48
HOXC4-203ENST00000507650 PLECQ15149 4684 aaKnown RBP12.08□□□□□ -0.48
HOXC4-203ENST00000507650 TRBV7-1A0A0A6YYK4 115 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 GABARAPO95166 117 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 SERPINE2P07093 398 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 OR13C7P0DN81 318 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 DEFA4P12838 97 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 SPATA25Q9BR10 227 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
HOXC4-203ENST00000507650 IGHV3-21A0A0B4J1V1 117 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 M0QYG6 137 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 DHFRP00374 187 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 TRAPPC2P0DI81 140 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 TRAPPC2BP0DI82 140 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 C8orf88P0DMB2 117 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 PTBP1P26599 531 aaKnown RBP eCLIP12.06□□□□□ -0.48
HOXC4-203ENST00000507650 RNASE12Q5GAN4 147 aaKnown RBP12.06□□□□□ -0.48
HOXC4-203ENST00000507650 BTNL8Q6UX41 500 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 CADM3Q8N126 398 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 UXS1Q8NBZ7 420 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 OR6F1Q8NGZ6 308 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 CXorf58Q96LI9 332 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 CMTM3Q96MX0 182 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 ZNF436Q9C0F3 470 aaPredicted RBP12.06□□□□□ -0.48
HOXC4-203ENST00000507650 TMEM14BQ9NUH8 114 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 TECRQ9NZ01 308 aaKnown RBP12.06□□□□□ -0.48
HOXC4-203ENST00000507650 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
HOXC4-203ENST00000507650 ZNF320A2RRD8 509 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 K7EIM0 57 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 LYL1P12980 280 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 ADMP35318 185 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 GUCA2BQ16661 112 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 TBC1D26Q86UD7 250 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 OR1L8Q8NGR8 309 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 SEC22AQ96IW7 307 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 CHRDL1Q9BU40 450 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 TUBA4BQ9H853 241 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 SRD5A3Q9H8P0 318 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 SCPEP1Q9HB40 452 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 KLK11Q9UBX7 282 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 OR51B2Q9Y5P1 312 aa12.05□□□□□ -0.48
HOXC4-203ENST00000507650 F11RQ9Y624 299 aaKnown RBP12.05□□□□□ -0.48
HOXC4-203ENST00000507650 EPPK1P58107 5090 aaKnown RBP12.04□□□□□ -0.48
HOXC4-203ENST00000507650 OR2T8A6NH00 312 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 C15orf61A6NNL5 157 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 OR11H12B2RN74 326 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 TGOLN2O43493 480 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 TPPPO94811 219 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 RCVRNP35243 200 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 ERVK-16P61578 105 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 IZUMO4Q1ZYL8 232 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 ZNF57Q68EA5 555 aaPredicted RBP12.04□□□□□ -0.48
HOXC4-203ENST00000507650 LHFPL1Q86WI0 220 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 VN1R17PQ8TDU5 208 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 TMEM190Q8WZ59 177 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 BORCS5Q969J3 196 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 HINT2Q9BX68 163 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 MIXL1Q9H2W2 232 aa12.04□□□□□ -0.48
HOXC4-203ENST00000507650 SCAF4O95104 1147 aaKnown RBP12.03□□□□□ -0.48
HOXC4-203ENST00000507650 PI3P19957 117 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 UCP3P55916 312 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 FAM106AQ4KMX7 169 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
HOXC4-203ENST00000507650 CMTM1Q8IZ96 169 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 OR4D10Q8NGI6 311 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 OR52I2Q8NH67 350 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 SCARB1Q8WTV0 552 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 LSM10Q969L4 123 aaKnown RBP12.03□□□□□ -0.48
HOXC4-203ENST00000507650 MRGPRFQ96AM1 343 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 ABHD1Q96SE0 405 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 SLC2A8Q9NY64 477 aa12.03□□□□□ -0.48
HOXC4-203ENST00000507650 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.49
HOXC4-203ENST00000507650 P0C879 139 aa12.02□□□□□ -0.49
HOXC4-203ENST00000507650 RORCP51449 518 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms